Detailed information NTG0580695

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: I6L26_RS05135
• Genome accession: NZ_CP077303
• Coordinates: 1078692..1079810 (-)
• Length: 372 a.a.
• NCBI ID: WP_016802720.1
• Uniprot ID: -
• Organism: Acinetobacter pittii strain FDAARGOS 1396
• Function: mediate the depolymerization of the type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1073692..1084810

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6L26_RS05105 (I6L26_05105)	-	1074520..1075368 (+)	849	WP_002121748.1	class II glutamine amidotransferase	-
I6L26_RS05110 (I6L26_05110)	-	1075620..1076075 (+)	456	WP_002121698.1	bacteriohemerythrin	-
I6L26_RS05115 (I6L26_05115)	-	1076229..1077296 (+)	1068	WP_005075306.1	hypothetical protein	-
I6L26_RS05120 (I6L26_05120)	-	1077296..1077610 (+)	315	WP_002121714.1	RnfH family protein	-
I6L26_RS05125 (I6L26_05125)	omlA	1077675..1078073 (-)	399	WP_002121740.1	outer membrane protein assembly factor BamE	-
I6L26_RS05130 (I6L26_05130)	fur	1078185..1078622 (+)	438	WP_002121758.1	ferric iron uptake transcriptional regulator	-
I6L26_RS05135 (I6L26_05135)	pilU	1078692..1079810 (-)	1119	WP_016802720.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
I6L26_RS05140 (I6L26_05140)	pilT	1079830..1080867 (-)	1038	WP_002121749.1	type IV pilus twitching motility protein PilT	Machinery gene
I6L26_RS05145 (I6L26_05145)	yggS	1080994..1081686 (+)	693	WP_016802719.1	YggS family pyridoxal phosphate-dependent enzyme	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 41959.20 Da
• Isoelectric Point: 6.6404

>NTDB_id=580695 I6L26_RS05135 WP_016802720.1 1078692..1079810(-) (pilU) [Acinetobacter pittii strain FDAARGOS 1396]
MDFNDLLNLMVEKKSSDLFITDGLAPSMKINGQIVPISKNSLSGEIIGQLLHSIMSEKQRKEFAETRECNFAIMNRDKTA
RFRVSAFQQRDMPGMVLRRIETKIPSIDDLQLPPVLKDLSMTKRGIIIFVGATGTGKSTSLASMISYRNHNSKGHIITIE
DPIEFIHEHAGCIITQREVGIDTDSFEIALKNTLRQAPDVILIGEIRTREVMDYAIGFAETGHLVLATMHANNANQALDR
IIHFFESDRHSQLYMDLSLNLKAMIAQQLIPTPDGNSRRAAIEILINSPLISDYIRKGEIHEIKDLMKRSRELGMQTFDQ
ALFDLYKSGQITYKDALKHADSPNDLRLTIKLAEEGPEQIAGTNQHLTFDRQ

Nucleotide

• Length: 1119 bp

>NTDB_id=580695 I6L26_RS05135 WP_016802720.1 1078692..1079810(-) (pilU) [Acinetobacter pittii strain FDAARGOS 1396]
ATGGATTTTAATGACCTGCTCAACCTGATGGTTGAAAAAAAATCATCCGACCTCTTTATTACAGATGGCCTTGCACCATC
GATGAAGATTAACGGGCAAATTGTTCCCATTTCAAAAAACAGTCTTTCAGGCGAAATTATTGGGCAACTATTACATTCCA
TCATGAGTGAAAAACAACGCAAAGAATTTGCTGAGACTCGTGAATGTAACTTTGCCATTATGAACCGTGATAAAACTGCC
CGCTTTCGTGTGAGTGCTTTTCAGCAACGCGACATGCCAGGCATGGTGCTACGTCGAATTGAAACCAAAATTCCTTCAAT
TGACGACTTACAATTACCGCCAGTGCTTAAAGATTTATCGATGACCAAACGTGGCATCATTATTTTTGTAGGGGCAACAG
GTACAGGTAAATCGACATCATTGGCTTCAATGATTAGCTATCGTAACCATAACTCTAAAGGTCACATCATTACCATTGAA
GACCCTATCGAGTTTATTCATGAACATGCTGGCTGCATCATTACCCAACGTGAAGTCGGGATCGATACAGACTCATTTGA
AATTGCTTTAAAGAATACTTTGCGACAAGCACCCGATGTAATCTTGATTGGTGAGATCCGTACGCGTGAAGTCATGGACT
ATGCGATTGGTTTTGCCGAAACGGGTCACTTGGTCTTAGCCACGATGCATGCGAACAACGCCAACCAAGCACTTGACCGT
ATTATTCACTTCTTTGAAAGTGACCGTCATAGCCAGCTCTACATGGATTTATCGCTTAATTTAAAGGCCATGATTGCACA
ACAACTTATTCCGACTCCAGATGGTAATTCGCGCCGTGCAGCGATCGAGATTCTCATTAACTCACCACTAATTTCAGACT
ATATTCGCAAAGGCGAAATTCATGAAATTAAAGATTTAATGAAACGCTCACGTGAACTCGGTATGCAAACTTTTGACCAA
GCACTGTTTGATCTCTATAAGTCAGGACAAATTACCTACAAAGATGCATTAAAACATGCCGACTCACCAAACGATTTACG
TTTAACAATTAAGCTTGCCGAAGAAGGTCCTGAGCAAATTGCAGGCACAAATCAGCATTTAACCTTCGACAGACAGTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (34-270)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Acinetobacter baylyi ADP1	75.132	100	0.763
pilU	Pseudomonas stutzeri DSM 10701	68.733	99.731	0.685
pilU	Vibrio cholerae strain A1552	53.514	99.462	0.532
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	41.209	97.849	0.403
pilT	Legionella pneumophila strain Lp02	39.941	90.86	0.363
pilT	Legionella pneumophila strain ERS1305867	39.941	90.86	0.363