Detailed information
Bioinformatically predicted
Overview
| Name | comGE/cglE | Type | Machinery gene |
| Locus tag | SPN034156_RS04950 | Genome accession | NC_021006 |
| Coordinates | 906130..906432 (-) | Length | 100 a.a. |
| NCBI ID | WP_000413382.1 | Uniprot ID | - |
| Organism | Streptococcus pneumoniae SPN034156 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 901130..911432
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SPN034156_RS04915 (SPN034156_08800) | rnpA | 901809..902180 (-) | 372 | WP_000739244.1 | ribonuclease P protein component | - |
| SPN034156_RS13030 | - | 902197..902328 (-) | 132 | WP_000768904.1 | hypothetical protein | - |
| SPN034156_RS04920 (SPN034156_08810) | - | 902329..903519 (-) | 1191 | WP_000167765.1 | acetate kinase | - |
| SPN034156_RS04925 (SPN034156_08820) | comYH | 903570..904523 (-) | 954 | WP_000345099.1 | class I SAM-dependent methyltransferase | Machinery gene |
| SPN034156_RS11320 (SPN034156_08830) | - | 904584..905178 (-) | 595 | Protein_911 | methyltransferase domain-containing protein | - |
| SPN034156_RS04940 (SPN034156_08840) | comGG/cglG | 905315..905728 (-) | 414 | WP_000265624.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| SPN034156_RS04945 (SPN034156_08850) | comGF/cglF | 905706..906167 (-) | 462 | WP_000250542.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| SPN034156_RS04950 (SPN034156_08860) | comGE/cglE | 906130..906432 (-) | 303 | WP_000413382.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| SPN034156_RS04955 (SPN034156_08870) | comGD/cglD | 906395..906799 (-) | 405 | WP_000588013.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| SPN034156_RS04960 (SPN034156_08880) | comGC/cglC | 906792..907118 (-) | 327 | WP_000738636.1 | comG operon protein ComGC | Machinery gene |
| SPN034156_RS04965 (SPN034156_08890) | comGB/cglB | 907120..908136 (-) | 1017 | WP_074017570.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| SPN034156_RS04970 (SPN034156_08900) | comGA/cglA/cilD | 908084..909025 (-) | 942 | WP_000249552.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| SPN034156_RS04975 (SPN034156_08910) | - | 909101..909466 (-) | 366 | WP_000286415.1 | DUF1033 family protein | - |
| SPN034156_RS04980 (SPN034156_08920) | - | 909617..910675 (-) | 1059 | WP_000649468.1 | zinc-dependent alcohol dehydrogenase family protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 11108.08 Da Isoelectric Point: 9.7273
>NTDB_id=58027 SPN034156_RS04950 WP_000413382.1 906130..906432(-) (comGE/cglE) [Streptococcus pneumoniae SPN034156]
MEKLNALRKQKIRAVILLEAVVALAIFASIATLLLGQIQKNRQEEAKILQKEEVLRVAKMALQTGQNQVSINGVEIQVFS
SEKGLEVYHGSEQLLAIKEP
MEKLNALRKQKIRAVILLEAVVALAIFASIATLLLGQIQKNRQEEAKILQKEEVLRVAKMALQTGQNQVSINGVEIQVFS
SEKGLEVYHGSEQLLAIKEP
Nucleotide
Download Length: 303 bp
>NTDB_id=58027 SPN034156_RS04950 WP_000413382.1 906130..906432(-) (comGE/cglE) [Streptococcus pneumoniae SPN034156]
ATGGAAAAATTAAACGCATTAAGGAAACAAAAAATTAGGGCAGTGATTTTACTGGAAGCAGTAGTCGCTCTAGCTATCTT
TGCCAGCATTGCGACCCTCCTTTTGGGACAAATTCAAAAAAATAGGCAAGAGGAAGCAAAAATCTTGCAAAAGGAAGAAG
TCTTGAGGGTAGCTAAGATGGCCCTGCAGACGGGGCAAAATCAGGTAAGCATCAACGGAGTTGAGATTCAGGTATTTTCT
AGTGAAAAAGGATTGGAGGTCTACCATGGTTCAGAACAGTTGTTGGCAATCAAAGAGCCATAA
ATGGAAAAATTAAACGCATTAAGGAAACAAAAAATTAGGGCAGTGATTTTACTGGAAGCAGTAGTCGCTCTAGCTATCTT
TGCCAGCATTGCGACCCTCCTTTTGGGACAAATTCAAAAAAATAGGCAAGAGGAAGCAAAAATCTTGCAAAAGGAAGAAG
TCTTGAGGGTAGCTAAGATGGCCCTGCAGACGGGGCAAAATCAGGTAAGCATCAACGGAGTTGAGATTCAGGTATTTTCT
AGTGAAAAAGGATTGGAGGTCTACCATGGTTCAGAACAGTTGTTGGCAATCAAAGAGCCATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE/cglE | Streptococcus pneumoniae Rx1 |
100 |
100 |
1 |
| comGE/cglE | Streptococcus pneumoniae D39 |
100 |
100 |
1 |
| comGE/cglE | Streptococcus pneumoniae R6 |
100 |
100 |
1 |
| comGE/cglE | Streptococcus pneumoniae TIGR4 |
100 |
100 |
1 |
| comGE/cglE | Streptococcus mitis NCTC 12261 |
98 |
100 |
0.98 |
| comGE/cglE | Streptococcus mitis SK321 |
98 |
100 |
0.98 |
| comYE | Streptococcus mutans UA140 |
44.444 |
90 |
0.4 |
| comYE | Streptococcus mutans UA159 |
44.444 |
90 |
0.4 |