Detailed information NTG0579994

Bioinformatically predicted

Overview

• Name: comB
• Type: Regulator
• Locus tag: I6L84_RS00495
• Genome accession: NZ_CP077224
• Coordinates: 85779..87137 (+)
• Length: 452 a.a.
• NCBI ID: WP_060554270.1
• Uniprot ID: -
• Organism: Streptococcus gordonii strain FDAARGOS 1454
• Function: transport of ComC (predicted from homology) Competence regulation

Genomic Context

Location: 80779..92137

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6L84_RS00480 (I6L84_00480)	-	81562..82284 (+)	723	WP_045504753.1	ABC transporter ATP-binding protein	-
I6L84_RS00485 (I6L84_00485)	rpsD	82550..83161 (+)	612	WP_008810013.1	30S ribosomal protein S4	-
I6L84_RS00490 (I6L84_00490)	comA	83616..85769 (+)	2154	WP_060554271.1	peptide cleavage/export ABC transporter ComA	Regulator
I6L84_RS00495 (I6L84_00495)	comB	85779..87137 (+)	1359	WP_060554270.1	competence pheromone export protein ComB	Regulator
I6L84_RS00500 (I6L84_00500)	lytF	87254..88903 (-)	1650	WP_060554269.1	GBS Bsp-like repeat-containing protein	Regulator
I6L84_RS00505 (I6L84_00505)	purD	89147..90406 (+)	1260	WP_060554268.1	phosphoribosylamine--glycine ligase	-
I6L84_RS00510 (I6L84_00510)	-	90461..91654 (+)	1194	WP_060954916.1	ATP-grasp domain-containing protein	-

Sequence

Protein

• Length: 452 a.a.
• Molecular weight: 49812.04 Da
• Isoelectric Point: 5.9046

>NTDB_id=579994 I6L84_RS00495 WP_060554270.1 85779..87137(+) (comB) [Streptococcus gordonii strain FDAARGOS 1454]
MNEQFLESAEFYQKRYHNFASCLIVPSLILLVFLVGFSMLAKKEITISSRASVEASRVLAQIQSTSNQPIIANHLSENKE
VKKGDLLIQYAVEGEGAQEQKFSSQLDLLKDQKGKLETLRSSLESGRNQFTEPDSYGYEQSFKDYQNQVASMTSSVNQQN
ATIASQNAAASQSQAELGGVISDVDSKLNDYRNLKNAIQSGVGIDASQPLYSLYQSYRDQLSSAEDKATAQSQIVAQLDG
QISQLEATAATYRVQYAGAGAQQAYASNLSSQLASLKAQYLVKVGQELTTLTQQILEAESNLKLQETVSKRGQILAEMDG
LLHLNPEVQGSTLVAEGTALAQIYPKITSERKIKIVTYVSSKDVSTIKNGDKVRFITADDANKQMILTSQISSIDANATQ
TKQGNFFKVECEMAVSKDQAKKLRYGLEGKFVMVTGQKTYFSYYMEKFFNLG

Nucleotide

• Length: 1359 bp

>NTDB_id=579994 I6L84_RS00495 WP_060554270.1 85779..87137(+) (comB) [Streptococcus gordonii strain FDAARGOS 1454]
ATGAATGAACAGTTTTTAGAAAGTGCAGAGTTTTATCAGAAACGTTATCATAATTTTGCTAGTTGTTTAATTGTGCCAAG
TCTTATTTTACTAGTATTTCTAGTTGGTTTTTCCATGCTGGCTAAAAAGGAAATTACGATTTCTAGCCGTGCTTCTGTAG
AAGCTAGCCGAGTACTGGCTCAGATTCAGTCAACTAGTAACCAGCCTATCATTGCGAATCATTTGTCAGAAAACAAGGAG
GTCAAAAAAGGGGACCTGCTAATCCAGTATGCAGTAGAAGGAGAGGGGGCTCAGGAACAGAAGTTTTCCAGCCAGCTTGA
CTTACTCAAAGATCAAAAGGGCAAACTAGAAACTTTGCGTTCCAGTTTAGAAAGCGGGCGTAATCAATTCACTGAGCCAG
ATAGTTATGGCTATGAACAAAGCTTTAAAGACTACCAGAATCAAGTAGCGAGTATGACTAGTTCTGTGAATCAGCAAAAT
GCTACGATTGCTTCACAAAATGCAGCGGCCAGTCAGTCTCAGGCGGAACTGGGCGGTGTTATCAGTGATGTGGATAGCAA
ACTAAATGACTATCGAAACTTGAAAAATGCCATTCAAAGTGGGGTGGGTATAGATGCATCGCAACCTCTTTACTCCTTGT
ATCAGTCCTATCGTGATCAGTTGAGTTCGGCAGAGGATAAGGCAACAGCTCAAAGTCAGATTGTAGCTCAATTAGATGGG
CAAATCTCTCAATTAGAAGCAACAGCTGCGACTTATCGTGTCCAATATGCTGGTGCAGGCGCCCAACAAGCCTATGCTAG
CAATTTATCCAGTCAGTTGGCTTCACTGAAAGCCCAGTATCTGGTCAAGGTAGGACAAGAATTGACCACTCTGACTCAGC
AAATCTTGGAAGCCGAGAGCAATCTTAAACTTCAAGAAACAGTCTCTAAGCGAGGTCAGATTTTGGCTGAAATGGATGGC
TTGCTTCACTTAAATCCAGAAGTGCAAGGATCTACTCTGGTGGCAGAAGGAACAGCTTTGGCTCAGATTTATCCTAAAAT
CACCAGTGAACGAAAAATCAAAATTGTCACATATGTCTCTTCCAAGGATGTATCTACTATTAAAAATGGAGACAAGGTGC
GCTTTATCACTGCTGATGACGCTAACAAACAAATGATTTTGACATCCCAAATTTCCAGTATTGACGCCAATGCTACCCAA
ACCAAACAGGGGAATTTCTTTAAAGTAGAATGCGAAATGGCTGTTAGTAAAGATCAAGCTAAGAAGCTCCGCTATGGCTT
GGAAGGTAAATTCGTCATGGTAACTGGGCAAAAGACTTATTTCAGCTATTATATGGAGAAGTTTTTTAATCTTGGTTGA

Domains

Predicted by InterproScan.

• HlyD family secretion protein (HlyD_3) (314-426)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comB	Streptococcus gordonii str. Challis substr. CH1	98.009	100	0.98
comB	Streptococcus pneumoniae Rx1	56.222	99.558	0.56
comB	Streptococcus pneumoniae D39	56.222	99.558	0.56
comB	Streptococcus pneumoniae R6	56.222	99.558	0.56
comB	Streptococcus mitis NCTC 12261	56	99.558	0.558
comB	Streptococcus pneumoniae TIGR4	55.778	99.558	0.555
comB	Streptococcus mitis SK321	55.333	99.558	0.551