Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   KQ224_RS06775 Genome accession   NZ_CP076721
Coordinates   1309019..1310200 (-) Length   393 a.a.
NCBI ID   WP_174846270.1    Uniprot ID   -
Organism   Streptococcus parasuis strain H35     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1304019..1315200
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KQ224_RS06750 (KQ224_06750) - 1304380..1304583 (-) 204 WP_216806275.1 DUF951 domain-containing protein -
  KQ224_RS11495 - 1304932..1305249 (-) 318 WP_253952794.1 hypothetical protein -
  KQ224_RS06760 (KQ224_06760) dnaN 1305341..1306477 (-) 1137 WP_171989299.1 DNA polymerase III subunit beta -
  KQ224_RS06765 (KQ224_06765) dnaA 1306632..1307996 (-) 1365 WP_174846271.1 chromosomal replication initiator protein DnaA -
  KQ224_RS06770 (KQ224_06770) spo0J 1308198..1308956 (-) 759 WP_171989297.1 ParB/RepB/Spo0J family partition protein Regulator
  KQ224_RS06775 (KQ224_06775) htrA 1309019..1310200 (-) 1182 WP_174846270.1 S1C family serine protease Regulator
  KQ224_RS06780 (KQ224_06780) rlmH 1310393..1310872 (+) 480 WP_130554909.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  KQ224_RS06785 (KQ224_06785) - 1310900..1311562 (+) 663 WP_239604379.1 YoaK family protein -
  KQ224_RS06805 (KQ224_06805) - 1311992..1314571 (-) 2580 WP_216806276.1 YfhO family protein -

Sequence


Protein


Download         Length: 393 a.a.        Molecular weight: 41140.77 Da        Isoelectric Point: 4.2375

>NTDB_id=577589 KQ224_RS06775 WP_174846270.1 1309019..1310200(-) (htrA) [Streptococcus parasuis strain H35]
MKKLLKFVILFVVGFLGGIGGYYFASSTLTQGNSTSNQANTTSVSNVQYTNDTSTTQAVEKVQDAVVSVINYQTQSSNSL
SSIFGNIESSDELAVAGEGSGVIYKKDGDTAYIVTNNHVISGAEKIDILLASGEKLSGELVGADTYSDIAVIKIAADKVT
TIAEFANSDTIKVGETAIAIGSPLGSVYANTVTQGIISSLSRTVTSQTEDGQTISTNAIQTDTAINPGNSGGPLINIQGQ
VIGINSSKITSSSVSSSGVAVEGMGFAIPSNDTVQIINQLETNGKVTRPALGVQMVNLTDLSTSQLEKAGLANTDLTSGV
LIVSTQSGLPADGKFEPYDVIIEIDGETIENKSDLQSELYKHQIGDTITVSYYRNNKKMTVDIKLTHSTDDLS

Nucleotide


Download         Length: 1182 bp        

>NTDB_id=577589 KQ224_RS06775 WP_174846270.1 1309019..1310200(-) (htrA) [Streptococcus parasuis strain H35]
ATGAAAAAATTATTGAAATTTGTTATTTTGTTTGTTGTTGGATTTTTAGGAGGAATTGGTGGGTATTACTTTGCTTCATC
AACTCTGACTCAAGGAAATTCTACTTCAAATCAAGCAAATACAACCAGTGTGAGCAATGTTCAATATACCAACGATACTT
CCACCACTCAAGCTGTGGAAAAAGTTCAAGATGCTGTTGTCTCCGTTATCAATTATCAAACTCAATCATCGAATAGCCTC
AGTTCTATTTTTGGCAACATTGAAAGTTCAGATGAGCTAGCCGTTGCTGGAGAAGGTTCAGGTGTTATTTATAAAAAAGA
TGGTGATACAGCATATATTGTTACAAACAACCACGTAATTTCAGGTGCTGAAAAAATCGATATACTTTTGGCTTCTGGAG
AAAAGCTTAGCGGAGAACTCGTAGGTGCAGATACTTATTCAGACATTGCTGTTATCAAAATTGCTGCAGATAAAGTGACC
ACTATTGCTGAATTTGCTAATTCAGACACAATTAAAGTTGGAGAAACTGCGATTGCAATTGGTAGCCCATTAGGAAGTGT
CTATGCAAATACAGTAACTCAGGGGATTATTTCTAGTCTCAGTCGTACAGTAACTTCACAAACAGAAGATGGCCAAACAA
TCTCAACAAATGCTATCCAGACTGATACAGCCATTAACCCAGGTAACTCAGGTGGACCACTTATCAATATTCAAGGACAA
GTTATCGGTATCAACTCAAGTAAAATAACCTCTAGTTCTGTCAGCAGTTCAGGAGTTGCAGTAGAAGGAATGGGCTTTGC
AATTCCCTCAAATGATACTGTACAGATAATTAATCAATTAGAAACAAATGGTAAAGTTACTCGTCCAGCTCTTGGCGTAC
AAATGGTCAATCTAACAGACCTATCTACTAGTCAATTAGAAAAAGCAGGATTAGCAAATACAGACTTAACATCTGGAGTA
CTAATTGTATCTACTCAATCAGGTTTGCCAGCTGATGGAAAATTTGAACCATATGATGTCATTATTGAAATCGATGGTGA
AACCATTGAAAATAAGAGTGATTTACAAAGTGAACTTTACAAGCATCAAATTGGCGACACCATAACTGTTAGCTATTATA
GAAATAATAAGAAAATGACTGTTGACATTAAGTTGACACATTCAACGGATGATTTGTCATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

61.013

100

0.613

  htrA Streptococcus gordonii str. Challis substr. CH1

59.645

100

0.598

  htrA Streptococcus pneumoniae Rx1

58.163

99.746

0.58

  htrA Streptococcus pneumoniae TIGR4

58.163

99.746

0.58

  htrA Streptococcus pneumoniae D39

58.163

99.746

0.58

  htrA Streptococcus pneumoniae R6

58.163

99.746

0.58

  htrA Streptococcus mitis NCTC 12261

57.653

99.746

0.575