Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   KQ224_RS06770 Genome accession   NZ_CP076721
Coordinates   1308198..1308956 (-) Length   252 a.a.
NCBI ID   WP_171989297.1    Uniprot ID   -
Organism   Streptococcus parasuis strain H35     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1303198..1313956
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KQ224_RS06745 (KQ224_06745) - 1303922..1304278 (-) 357 WP_174846273.1 helix-turn-helix domain-containing protein -
  KQ224_RS06750 (KQ224_06750) - 1304380..1304583 (-) 204 WP_216806275.1 DUF951 domain-containing protein -
  KQ224_RS11495 - 1304932..1305249 (-) 318 WP_253952794.1 hypothetical protein -
  KQ224_RS06760 (KQ224_06760) dnaN 1305341..1306477 (-) 1137 WP_171989299.1 DNA polymerase III subunit beta -
  KQ224_RS06765 (KQ224_06765) dnaA 1306632..1307996 (-) 1365 WP_174846271.1 chromosomal replication initiator protein DnaA -
  KQ224_RS06770 (KQ224_06770) spo0J 1308198..1308956 (-) 759 WP_171989297.1 ParB/RepB/Spo0J family partition protein Regulator
  KQ224_RS06775 (KQ224_06775) htrA 1309019..1310200 (-) 1182 WP_174846270.1 S1C family serine protease Regulator
  KQ224_RS06780 (KQ224_06780) rlmH 1310393..1310872 (+) 480 WP_130554909.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  KQ224_RS06785 (KQ224_06785) - 1310900..1311562 (+) 663 WP_239604379.1 YoaK family protein -

Sequence

Protein


Download         Length: 252 a.a.        Molecular weight: 28969.39 Da        Isoelectric Point: 9.4765

>NTDB_id=577588 KQ224_RS06770 WP_171989297.1 1308198..1308956(-) (spo0J) [Streptococcus parasuis strain H35]
MEELHYLKIKDIQANPYQPRLHFDEEKLLELAQSIKENGVIQPIIVRRSPLIGFELLAGERRLRASQLAGLTEIPAVIKH
LSDDDLLYQAIIENLQRSDLNPIEEAHSYEKLIKKGLTHDEIAQIMGKSRPYITNLLRLLHLSESTRQAVETGKITQGHA
RQLVALSERQQAEWVQKIQEKDISVRQLETILSSKKKKTIRKSNQFVAEEEEKLAKLLGTKVTIQQKKNGSGQLTIQFQN
IEEFERIINSLK

Nucleotide


Download         Length: 759 bp        

>NTDB_id=577588 KQ224_RS06770 WP_171989297.1 1308198..1308956(-) (spo0J) [Streptococcus parasuis strain H35]
ATGGAAGAACTACACTATCTCAAAATAAAAGACATTCAGGCCAATCCCTATCAACCAAGATTGCATTTTGATGAAGAAAA
ATTATTGGAATTAGCTCAATCTATCAAAGAAAATGGCGTCATTCAACCTATTATTGTTCGCAGATCACCGCTGATTGGTT
TTGAGTTACTTGCTGGTGAAAGACGATTAAGAGCTAGTCAACTAGCGGGATTAACAGAGATTCCAGCAGTCATCAAGCAT
CTATCTGATGATGATTTACTCTACCAAGCTATCATAGAAAACTTACAACGCTCTGACCTCAATCCTATTGAAGAGGCTCA
TTCCTACGAAAAGTTGATAAAAAAAGGCTTAACACATGATGAGATTGCCCAAATCATGGGAAAATCACGACCATATATCA
CTAATCTTCTTCGTTTACTCCATTTATCCGAATCTACGAGGCAAGCAGTAGAAACAGGAAAAATCACACAAGGGCATGCT
AGACAGCTAGTAGCACTATCAGAGAGACAACAAGCAGAATGGGTTCAAAAAATCCAAGAAAAGGATATCAGCGTACGACA
GTTAGAAACAATACTATCCTCTAAAAAGAAAAAAACAATTAGAAAATCCAACCAATTTGTTGCAGAAGAAGAAGAGAAAT
TAGCAAAACTACTTGGAACCAAGGTAACAATCCAACAAAAGAAAAATGGATCGGGACAACTGACTATTCAATTTCAAAAC
ATCGAAGAATTTGAAAGAATTATCAACAGTCTGAAATAG

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(145-191)

ParB/Sulfiredoxin domain (ParB_N)

(6-94)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

54.941

100

0.552