Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   KRG72_RS09310 Genome accession   NZ_CP076703
Coordinates   1882126..1883376 (+) Length   416 a.a.
NCBI ID   WP_258255316.1    Uniprot ID   -
Organism   Streptococcus equinus strain S1     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1877126..1888376
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KRG72_RS09285 (KRG72_09285) - 1878039..1880615 (+) 2577 WP_258255313.1 YfhO family protein -
  KRG72_RS09305 (KRG72_09305) rlmH 1881432..1881911 (-) 480 WP_074564722.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  KRG72_RS09310 (KRG72_09310) htrA 1882126..1883376 (+) 1251 WP_258255316.1 S1C family serine protease Regulator
  KRG72_RS09315 (KRG72_09315) spo0J 1883435..1884217 (+) 783 WP_074965479.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 416 a.a.        Molecular weight: 43219.43 Da        Isoelectric Point: 4.7392

>NTDB_id=577491 KRG72_RS09310 WP_258255316.1 1882126..1883376(+) (htrA) [Streptococcus equinus strain S1]
MKKIKFRKVNYKKILKPLSVILVGFIGGVAGTLLILNMAGISINNVSGSSTKTTTSKVSYSNTNDTTKAVEKVGEAVVSV
INYQSNSSSNDLYMQMFGGNLDNNTNNSSDSDLSIASEGSGVIYKKDGNSAYVVTNNHVVDGASQIEIMLSDGTKVVGEL
VGADTYSDIAVVKIASDKVTTVAEFADSDKITVGETAIAIGSPLGTDYANSVTQGIVSSLSRTVTMTNDDGETISTNAIQ
TDAAINPGNSGGALINIEGQVIGINSSKISSTSDSGSGNSVEGMGFAIPANDVVKIINQLEANGKVIRPALGITMANLSD
LSTTTISRLNIPTSVTAGIVVASVQSGMPAEGALKKYDVITAIDDKDVSSITDLQSVLYGHSTGDSIKVTFYRGTDKKTE
TIKLTKTTQDLSSSNQ

Nucleotide


Download         Length: 1251 bp        

>NTDB_id=577491 KRG72_RS09310 WP_258255316.1 1882126..1883376(+) (htrA) [Streptococcus equinus strain S1]
GTGAAAAAAATAAAATTTCGAAAAGTCAATTACAAAAAAATCCTTAAACCACTATCCGTTATTTTAGTTGGTTTCATCGG
AGGAGTTGCTGGAACCTTACTCATTTTGAATATGGCTGGCATCTCTATTAATAATGTTAGTGGTTCAAGTACAAAAACCA
CAACAAGTAAAGTAAGTTACTCAAATACTAATGATACGACGAAAGCTGTCGAAAAAGTGGGAGAAGCAGTCGTATCAGTC
ATCAATTATCAATCAAATAGCTCTTCAAATGATTTGTATATGCAAATGTTTGGTGGCAATTTAGATAATAACACTAATAA
TAGCTCAGATAGTGATTTAAGCATCGCTAGTGAAGGTTCTGGGGTTATTTACAAAAAAGATGGCAATTCTGCTTACGTCG
TTACTAATAACCACGTTGTCGATGGTGCTAGTCAAATCGAAATCATGCTTTCTGACGGTACAAAAGTAGTCGGTGAATTA
GTCGGTGCCGATACATACTCAGATATCGCCGTTGTCAAAATTGCTTCTGATAAAGTCACAACTGTAGCTGAATTTGCTGA
TTCAGATAAAATTACTGTTGGTGAAACAGCCATTGCTATTGGTAGCCCTCTAGGTACTGATTACGCTAACTCAGTAACCC
AAGGAATTGTCTCAAGTCTAAGCCGTACAGTTACAATGACTAACGACGATGGCGAAACAATTTCAACTAATGCTATCCAA
ACTGATGCCGCTATTAACCCAGGTAACTCTGGTGGTGCTTTGATTAACATTGAAGGACAAGTTATCGGTATTAATTCAAG
TAAAATTTCTTCTACCTCAGATTCTGGATCAGGTAATTCTGTAGAAGGTATGGGATTTGCTATTCCAGCTAATGATGTGG
TTAAAATTATTAATCAATTAGAAGCAAACGGAAAAGTTATCCGTCCAGCACTTGGTATCACAATGGCTAACCTAAGCGAT
TTGTCAACAACAACAATCAGTCGCCTAAATATTCCAACTAGCGTCACAGCTGGTATCGTCGTTGCTTCAGTTCAATCAGG
TATGCCTGCTGAAGGAGCACTTAAAAAATACGATGTAATCACAGCTATCGATGATAAAGATGTTTCTTCTATCACAGATC
TTCAAAGTGTCCTTTACGGTCATTCAACTGGAGATTCTATTAAGGTAACCTTCTATCGTGGTACTGACAAGAAAACAGAA
ACTATTAAACTAACGAAAACAACACAAGACCTCTCTTCATCAAATCAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

64.339

96.394

0.62

  htrA Streptococcus gordonii str. Challis substr. CH1

60.494

97.356

0.589

  htrA Streptococcus mitis NCTC 12261

58.513

100

0.587

  htrA Streptococcus pneumoniae TIGR4

58.881

98.798

0.582

  htrA Streptococcus pneumoniae D39

58.881

98.798

0.582

  htrA Streptococcus pneumoniae Rx1

58.881

98.798

0.582

  htrA Streptococcus pneumoniae R6

58.881

98.798

0.582