Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   KRG72_RS09315 Genome accession   NZ_CP076703
Coordinates   1883435..1884217 (+) Length   260 a.a.
NCBI ID   WP_074965479.1    Uniprot ID   -
Organism   Streptococcus equinus strain S1     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1878435..1889217
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KRG72_RS09305 (KRG72_09305) rlmH 1881432..1881911 (-) 480 WP_074564722.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  KRG72_RS09310 (KRG72_09310) htrA 1882126..1883376 (+) 1251 WP_258255316.1 S1C family serine protease Regulator
  KRG72_RS09315 (KRG72_09315) spo0J 1883435..1884217 (+) 783 WP_074965479.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 260 a.a.        Molecular weight: 29828.63 Da        Isoelectric Point: 9.6238

>NTDB_id=577492 KRG72_RS09315 WP_074965479.1 1883435..1884217(+) (spo0J) [Streptococcus equinus strain S1]
MIETLNLIPIDDIAPNPYQPRLKFKQEELEELSRSIKANGLIQPIIVRKSDIFGYELIAGERRLKASKMAGLSEIPAIIK
DITNKESMQLAIVENLQRSDLNPIEEAKAYQQLLDKNQMTHEELAQFMGKSRPYITNCLRLLNLPTIISHAVEKGELSQG
HARVLLTLKDEKEQEKWYQKILSEDMSVRKLEQAVKSTKKKKTSSKVSKKDIFIRHQEEELSKLLGLPVTLSLSKSGFKG
DLQLHFQSEEDLNRIINRLK

Nucleotide


Download         Length: 783 bp        

>NTDB_id=577492 KRG72_RS09315 WP_074965479.1 1883435..1884217(+) (spo0J) [Streptococcus equinus strain S1]
ATGATTGAAACACTTAATCTCATACCTATTGACGATATTGCTCCAAATCCTTACCAACCTCGCTTGAAATTTAAGCAAGA
AGAATTAGAAGAACTTTCTCGCTCAATAAAAGCAAACGGCCTCATACAGCCGATAATCGTCCGTAAATCAGATATTTTTG
GTTACGAGCTCATTGCAGGAGAAAGACGTCTTAAAGCATCAAAAATGGCTGGTTTAAGCGAAATTCCTGCAATTATAAAA
GATATTACTAATAAAGAAAGCATGCAGCTTGCCATTGTCGAAAATTTGCAGCGCTCTGACCTCAATCCTATTGAAGAAGC
CAAGGCTTATCAGCAATTGCTCGATAAAAACCAAATGACTCACGAAGAGTTGGCACAATTTATGGGAAAATCACGACCAT
ATATCACTAATTGCTTGCGCTTATTGAATTTACCGACGATTATTTCTCATGCCGTCGAAAAAGGTGAACTTTCTCAAGGA
CACGCGCGCGTGCTGCTGACACTTAAGGACGAAAAAGAGCAGGAGAAGTGGTACCAAAAAATTCTGAGCGAGGATATGAG
CGTTCGCAAACTTGAACAAGCTGTAAAATCTACTAAAAAGAAAAAAACATCTTCTAAAGTAAGCAAAAAAGATATTTTTA
TCCGTCATCAAGAAGAAGAATTATCAAAATTATTAGGTCTCCCTGTCACCTTATCACTTTCTAAAAGTGGCTTTAAAGGA
GACTTACAATTACATTTTCAATCAGAAGAAGACTTAAACAGAATTATCAACAGGCTAAAATAG

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(8-95)

HTH domain found in ParB protein (HTH_ParB)

(148-196)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

61.538

100

0.615