Detailed information NTG0577430

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: KRG72_RS00360
• Genome accession: NZ_CP076703
• Coordinates: 52443..53345 (+)
• Length: 300 a.a.
• NCBI ID: WP_258255361.1
• Uniprot ID: -
• Organism: Streptococcus equinus strain S1
• Function: activate transcription of comX (predicted from homology) Competence regulation

Genomic Context

Location: 47443..58345

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KRG72_RS00335 (KRG72_00335)	-	48632..49081 (+)	450	WP_258255349.1	DUF523 domain-containing protein	-
KRG72_RS00340 (KRG72_00340)	purE	49081..49569 (+)	489	WP_258255354.1	5-(carboxyamino)imidazole ribonucleotide mutase	-
KRG72_RS00345 (KRG72_00345)	purK	49556..50647 (+)	1092	WP_258255358.1	5-(carboxyamino)imidazole ribonucleotide synthase	-
KRG72_RS00350 (KRG72_00350)	-	50669..50893 (+)	225	WP_258255360.1	phosphoribosylaminoimidazole carboxylase	-
KRG72_RS00355 (KRG72_00355)	purB	50986..52284 (+)	1299	WP_006531307.1	adenylosuccinate lyase	-
KRG72_RS00360 (KRG72_00360)	comR	52443..53345 (+)	903	WP_258255361.1	XRE family transcriptional regulator	Regulator
KRG72_RS00365 (KRG72_00365)	ruvB	53519..54517 (+)	999	WP_074565269.1	Holliday junction branch migration DNA helicase RuvB	-
KRG72_RS00370 (KRG72_00370)	-	54690..55223 (+)	534	WP_258255363.1	DUF7010 family protein	-
KRG72_RS00375 (KRG72_00375)	-	55459..55890 (+)	432	WP_074965575.1	low molecular weight protein-tyrosine-phosphatase	-
KRG72_RS00380 (KRG72_00380)	-	55908..56288 (+)	381	WP_258255364.1	MORN repeat-containing protein	-
KRG72_RS00385 (KRG72_00385)	-	56285..58078 (+)	1794	WP_258255365.1	acyltransferase family protein	-

Sequence

Protein

• Length: 300 a.a.
• Molecular weight: 35365.31 Da
• Isoelectric Point: 4.5082

>NTDB_id=577430 KRG72_RS00360 WP_258255361.1 52443..53345(+) (comR) [Streptococcus equinus strain S1]
MEKFGEKIRLMREEKGISREEFCGDETELSVRQLARIELNQSIPNLSKASFIANRLGVKLGTLTDGDSLELPKRYKELKY
LILRTPTYKDEERVKQKDSYFDEIYDDFYDDLPEEEQLVVECMRSKADVFTTDNSHLATKLLEDYFHQIKTKKHYSINDL
IIIDLYMVCANASDYTYFMFNQEDFRDIAKNLLKQEKNLSLEEVFVLNNALFNSLSILLDLEMWDEIDSTFVVLKSLMAK
IQDYHKKPILNMIEWKYILKCTGDVERAQKLYEEAVLYANLIGDNYLAYKISEEWENDAT

Nucleotide

• Length: 903 bp

>NTDB_id=577430 KRG72_RS00360 WP_258255361.1 52443..53345(+) (comR) [Streptococcus equinus strain S1]
GTGGAAAAATTTGGGGAGAAGATCCGCTTGATGCGGGAGGAAAAGGGAATCTCACGCGAAGAATTCTGTGGGGATGAAAC
AGAATTATCGGTAAGACAATTAGCCAGAATCGAGTTGAATCAATCAATACCCAATCTCAGTAAAGCAAGCTTCATTGCCA
ATCGTCTGGGAGTAAAATTAGGTACCTTAACTGATGGTGACAGTTTAGAATTACCTAAGCGGTATAAAGAGTTGAAGTAT
TTAATATTGCGTACGCCAACGTACAAGGATGAAGAACGTGTAAAACAAAAAGATTCTTACTTTGATGAGATTTATGATGA
TTTTTATGATGACCTGCCAGAAGAGGAACAATTAGTTGTGGAGTGTATGCGCTCAAAAGCTGATGTTTTTACGACGGATA
ATAGTCACTTAGCTACTAAGCTATTGGAAGATTATTTTCATCAGATAAAGACAAAAAAACATTATTCTATTAATGATTTG
ATTATTATTGATTTATATATGGTTTGTGCTAATGCTTCGGACTATACATACTTTATGTTTAATCAAGAAGACTTTAGGGA
TATTGCCAAAAATCTTTTGAAACAGGAAAAAAATCTTTCTTTAGAGGAAGTATTCGTCTTGAACAATGCTTTATTCAATA
GTTTAAGTATATTGTTAGATTTAGAAATGTGGGATGAAATTGATAGTACTTTTGTGGTGTTAAAAAGTCTTATGGCAAAA
ATTCAAGATTATCATAAGAAACCTATTTTAAACATGATTGAATGGAAGTATATTTTAAAATGTACAGGTGATGTCGAGCG
GGCTCAGAAATTGTATGAAGAAGCTGTCTTGTATGCTAATTTAATTGGTGATAATTATTTGGCTTATAAAATCTCTGAAG
AGTGGGAAAATGATGCAACATGA

Domains

Predicted by InterproScan.

• ComR tetratricopeptide (ComR_TPR) (72-295)

• Helix-turn-helix (HTH_3) (8-61)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus infantarius subsp. infantarius ATCC BAA-102	53.472	96	0.513
comR	Streptococcus mutans UA159	46.488	99.667	0.463
comR	Streptococcus pyogenes MGAS315	44.966	99.333	0.447
comR	Streptococcus pyogenes MGAS8232	44.482	99.667	0.443
comR	Streptococcus suis D9	38.926	99.333	0.387
comR	Streptococcus suis P1/7	39.057	99	0.387
comR	Streptococcus suis 05ZYH33	39.057	99	0.387