Detailed information NTG0569564

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: KIW23_RS05265
• Genome accession: NZ_CP075561
• Coordinates: 1099091..1099930 (+)
• Length: 279 a.a.
• NCBI ID: WP_251314084.1
• Uniprot ID: -
• Organism: Floricoccus penangensis strain ML061-4
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1094091..1104930

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KIW23_RS05240 (KIW23_05250)	-	1094450..1095208 (+)	759	WP_251314079.1	ABC transporter ATP-binding protein	-
KIW23_RS05245 (KIW23_05255)	-	1095316..1096902 (+)	1587	WP_251314080.1	ATP-binding cassette domain-containing protein	-
KIW23_RS05250 (KIW23_05260)	ylqF	1097028..1097897 (+)	870	WP_251314081.1	ribosome biogenesis GTPase YlqF	-
KIW23_RS05255 (KIW23_05265)	-	1097898..1098677 (+)	780	WP_251314082.1	ribonuclease HII	-
KIW23_RS05260 (KIW23_05270)	-	1098796..1099023 (+)	228	WP_251314083.1	CBU_0592 family membrane protein	-
KIW23_RS05265 (KIW23_05275)	dprA	1099091..1099930 (+)	840	WP_251314084.1	DNA-processing protein DprA	Machinery gene
KIW23_RS05270 (KIW23_05280)	topA	1100036..1102150 (+)	2115	WP_251314085.1	type I DNA topoisomerase	-
KIW23_RS05275 (KIW23_05285)	trmFO	1102264..1103592 (+)	1329	WP_251314086.1	methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	-
KIW23_RS05280 (KIW23_05290)	xerS	1103668..1104738 (-)	1071	WP_251314087.1	tyrosine recombinase XerS	-

Sequence

Protein

• Length: 279 a.a.
• Molecular weight: 31250.18 Da
• Isoelectric Point: 10.0356

>NTDB_id=569564 KIW23_RS05265 WP_251314084.1 1099091..1099930(+) (dprA) [Floricoccus penangensis strain ML061-4]
MRISNGFDIYKLKRAGMTNLSILRILENNENQSLSQIAQLGRIKNKEIFIEKYKSLDIKKEKKNYRQFSSISILDSEYPT
RLKEIYNPPVLLFYSGNIDLLQKPILSFVGSRNASKIGIKTVHKLITELGNKFVIASGLAAGIDTASHISTMKNKGKTIA
VIGTGLDRYYPKENREIQNFISRNHLLLTEYLPGESPKRFHFPERNRILAGIALGVVVIEARIKSGSLITCQRALDEGRD
VFAVPGNIIEGNSSGCNFLIQDGAKLINSGLDVILEYDF

Nucleotide

• Length: 840 bp

>NTDB_id=569564 KIW23_RS05265 WP_251314084.1 1099091..1099930(+) (dprA) [Floricoccus penangensis strain ML061-4]
ATGCGTATTTCCAATGGTTTTGATATATATAAATTAAAAAGAGCAGGCATGACAAATTTATCTATTTTAAGGATTCTTGA
AAATAATGAAAATCAGTCATTAAGTCAAATTGCTCAATTAGGAAGAATTAAAAACAAAGAGATTTTTATTGAGAAATATA
AATCTTTAGATATAAAGAAGGAAAAGAAAAATTATAGACAATTTTCTTCTATTTCAATACTTGATTCTGAATACCCTACA
CGTTTAAAAGAAATTTATAATCCACCTGTACTTTTATTTTACTCAGGAAATATTGATTTGCTTCAAAAACCCATCTTATC
ATTTGTTGGGAGTAGGAATGCTAGCAAAATTGGTATTAAAACAGTACATAAATTAATTACTGAATTAGGAAATAAATTTG
TCATTGCCTCTGGTCTTGCAGCTGGTATAGATACAGCGAGTCATATTTCTACCATGAAAAATAAAGGAAAAACAATCGCA
GTAATTGGAACAGGGCTCGATAGATATTATCCGAAAGAAAATAGAGAAATTCAGAATTTTATAAGTAGGAATCACCTTCT
TTTAACTGAATATTTGCCTGGAGAGAGTCCGAAACGATTTCACTTCCCAGAAAGAAATAGAATATTAGCGGGTATTGCCC
TAGGTGTTGTGGTTATAGAAGCAAGAATTAAGAGTGGCAGTTTGATTACATGCCAAAGAGCTCTAGATGAAGGAAGAGAT
GTTTTTGCAGTTCCAGGTAATATAATAGAAGGAAATTCTTCGGGTTGTAACTTTTTGATTCAAGATGGTGCAAAGCTTAT
AAATAGTGGCTTAGACGTCATACTTGAGTATGATTTTTAA

Domains

Predicted by InterproScan.

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (5-60)

• DNA recombination-mediator protein A (DNA_processg_A) (66-268)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Lactococcus lactis subsp. cremoris KW2	57.455	98.566	0.566
dprA	Streptococcus mutans UA159	56.631	100	0.566
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	54.417	100	0.552
dprA/cilB/dalA	Streptococcus pneumoniae R6	54.417	100	0.552
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	54.417	100	0.552
dprA/cilB/dalA	Streptococcus pneumoniae D39	54.417	100	0.552
dprA/cilB/dalA	Streptococcus mitis SK321	54.417	100	0.552
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	54.064	100	0.548
dprA	Latilactobacillus sakei subsp. sakei 23K	39.147	92.473	0.362