Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   KIP81_RS09795 Genome accession   NZ_CP075172
Coordinates   1987113..1988372 (+) Length   419 a.a.
NCBI ID   WP_243602917.1    Uniprot ID   -
Organism   Streptococcus equinus strain SheepZ001     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1982113..1993372
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KIP81_RS09770 (KIP81_09755) - 1983000..1985582 (+) 2583 WP_243602916.1 YfhO family protein -
  KIP81_RS09790 (KIP81_09775) rlmH 1986421..1986900 (-) 480 WP_004233682.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  KIP81_RS09795 (KIP81_09780) htrA 1987113..1988372 (+) 1260 WP_243602917.1 trypsin-like peptidase domain-containing protein Regulator
  KIP81_RS09800 (KIP81_09785) spo0J 1988433..1989215 (+) 783 WP_243602918.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 419 a.a.        Molecular weight: 43451.28 Da        Isoelectric Point: 4.4136

>NTDB_id=568284 KIP81_RS09795 WP_243602917.1 1987113..1988372(+) (htrA) [Streptococcus equinus strain SheepZ001]
MKKVNFPKVKSKKILKPLSVILIGFIGGVAGTLLILNMAGISINNVSGSSTKTTTSKVSYSNSNDTTKAVSKVQDAVVSV
INYQSNTSSNDLYAQLFGDNANSNNSSSDDDLNISSEGSGVIYKKDGNSAYVVTNNHVVDGAEQLEIMLSDGTKVVGELV
GADTYSDIAVVKIASDKVSTVAEFADSDKITVGETAIAIGSPLGTDYANSVTQGIVSSLSRTVTMTNDDGETISTNAIQT
DAAINPGNSGGALINIEGQVIGINSSKISSTSSSGESVEGMGFAIPSNDVVKIINQLEENGKVIRPALGITMANLSDLST
VSISHLNIPTSVTGGVVVASVQSGMPAEGTLERYDVITAIDGEEVNSITDLQSILYGHSTGDSVKVTFYRGTAKKTETIK
LTKTTQDLSSSSDSSNQNQ

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=568284 KIP81_RS09795 WP_243602917.1 1987113..1988372(+) (htrA) [Streptococcus equinus strain SheepZ001]
ATGAAAAAAGTCAATTTTCCAAAAGTTAAATCAAAAAAAATTCTCAAGCCGTTGTCTGTCATTTTAATCGGATTCATCGG
AGGTGTAGCTGGGACGCTACTGATTTTAAATATGGCTGGCATTTCGATAAATAACGTTAGCGGTTCAAGTACTAAAACAA
CCACAAGTAAAGTAAGTTATTCAAATTCTAATGATACGACAAAAGCCGTTTCAAAAGTTCAAGATGCTGTCGTATCCGTT
ATTAATTATCAATCAAATACTTCATCAAATGATCTGTACGCTCAATTATTTGGTGATAATGCAAATAGCAACAATTCATC
GTCTGATGATGATTTAAACATCTCTAGCGAAGGTTCTGGTGTTATTTACAAAAAAGACGGAAATTCTGCCTACGTTGTAA
CAAATAACCACGTCGTTGACGGCGCTGAACAGCTCGAAATCATGCTATCTGATGGTACAAAAGTCGTTGGAGAATTAGTC
GGAGCTGATACTTATTCAGATATCGCTGTTGTCAAAATTGCTTCTGATAAAGTTTCTACCGTTGCCGAATTTGCTGACTC
AGATAAAATTACCGTCGGGGAAACAGCTATTGCCATTGGTAGCCCACTTGGAACTGACTACGCAAACTCTGTAACACAAG
GGATTGTCTCAAGTCTAAGTCGTACAGTAACAATGACTAATGACGATGGCGAAACTATCTCAACAAATGCTATCCAAACC
GATGCTGCTATTAACCCAGGTAACTCTGGAGGTGCTTTGATTAATATCGAAGGACAAGTTATCGGTATCAACTCAAGTAA
AATTTCTTCAACATCTAGTTCAGGTGAGTCTGTAGAAGGTATGGGATTTGCCATTCCATCTAACGATGTCGTCAAAATCA
TTAATCAATTGGAAGAAAACGGAAAAGTTATTCGTCCAGCACTTGGTATCACAATGGCTAACTTAAGCGATCTCTCAACT
GTATCTATTAGCCACCTTAACATTCCAACTAGTGTTACTGGAGGAGTTGTTGTAGCCTCAGTACAATCAGGTATGCCTGC
TGAAGGAACTCTTGAAAGATACGATGTCATCACAGCTATTGATGGTGAAGAAGTTAACTCAATCACAGACCTTCAAAGTA
TCCTTTACGGACACTCAACTGGAGACTCTGTCAAAGTTACTTTCTACCGCGGTACAGCTAAGAAAACTGAAACAATTAAA
CTAACTAAAACAACTCAAGACCTCTCTTCTTCATCAGATTCATCAAATCAAAATCAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

64.356

96.42

0.621

  htrA Streptococcus gordonii str. Challis substr. CH1

60.349

95.704

0.578

  htrA Streptococcus mitis NCTC 12261

58.765

96.659

0.568

  htrA Streptococcus pneumoniae TIGR4

59.148

95.227

0.563

  htrA Streptococcus pneumoniae Rx1

59.148

95.227

0.563

  htrA Streptococcus pneumoniae D39

59.148

95.227

0.563

  htrA Streptococcus pneumoniae R6

59.148

95.227

0.563