Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   KIP81_RS09800 Genome accession   NZ_CP075172
Coordinates   1988433..1989215 (+) Length   260 a.a.
NCBI ID   WP_243602918.1    Uniprot ID   -
Organism   Streptococcus equinus strain SheepZ001     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1983433..1994215
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KIP81_RS09790 (KIP81_09775) rlmH 1986421..1986900 (-) 480 WP_004233682.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  KIP81_RS09795 (KIP81_09780) htrA 1987113..1988372 (+) 1260 WP_243602917.1 trypsin-like peptidase domain-containing protein Regulator
  KIP81_RS09800 (KIP81_09785) spo0J 1988433..1989215 (+) 783 WP_243602918.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 260 a.a.        Molecular weight: 29878.55 Da        Isoelectric Point: 9.9946

>NTDB_id=568285 KIP81_RS09800 WP_243602918.1 1988433..1989215(+) (spo0J) [Streptococcus equinus strain SheepZ001]
MTEKLNLINIDDISPNPYQPRLEFKQEELEELSRSIKANGLIQPIIVRKSAIFGYELIAGERRLKASKMAGLSEIPAIIK
EISNKESMQLAIVENLQRSDLNPIEEAKAYQQLLDRNQMTHEELAQFMGKSRPYITNCLRLLNLPSAISKAVERGQLSQG
HARVLLTLKNENEQEKWYQKVITEEISVRKLEELVKKSKSTKKSSKKNKKNIFIRHQEEELSKLLGVPVSLSLAKSGFKG
DLQLHFQSEEDFNRIINRLK

Nucleotide


Download         Length: 783 bp        

>NTDB_id=568285 KIP81_RS09800 WP_243602918.1 1988433..1989215(+) (spo0J) [Streptococcus equinus strain SheepZ001]
ATGACTGAGAAACTTAACCTAATAAATATTGACGATATTTCTCCAAATCCTTACCAACCACGCTTAGAATTTAAACAAGA
AGAATTAGAAGAGCTATCCCGCTCAATCAAAGCTAATGGCCTTATTCAGCCCATTATCGTTCGAAAATCTGCTATCTTTG
GATATGAGCTTATAGCAGGAGAGAGACGTCTTAAAGCTTCTAAAATGGCTGGTTTGAGCGAAATTCCAGCGATTATCAAA
GAAATTTCTAATAAAGAAAGTATGCAACTGGCTATTGTCGAAAATTTGCAACGTTCAGACCTTAATCCCATCGAGGAAGC
AAAAGCCTATCAGCAATTATTAGACAGAAATCAGATGACACACGAAGAATTGGCTCAATTTATGGGAAAATCTCGTCCTT
ACATCACCAATTGCTTACGATTATTGAATTTACCAAGTGCCATTTCTAAAGCCGTTGAGCGAGGGCAATTATCCCAAGGT
CACGCGCGCGTGCTTCTCACATTAAAAAATGAAAATGAACAAGAGAAGTGGTACCAAAAAGTCATTACTGAAGAAATCAG
CGTCCGAAAACTGGAAGAACTGGTCAAAAAATCTAAATCCACTAAAAAATCTTCAAAAAAAAATAAAAAAAATATTTTTA
TTCGTCATCAAGAAGAAGAACTGTCAAAATTGTTAGGAGTCCCAGTTAGCTTATCCCTTGCCAAATCAGGCTTCAAGGGA
GATTTGCAATTGCATTTTCAGAGCGAAGAAGACTTTAACAGAATTATCAACAGGCTAAAATAG

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(8-95)

HTH domain found in ParB protein (HTH_ParB)

(148-197)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

60.618

99.615

0.604