Detailed information NTG0568224

Bioinformatically predicted

Overview

• Name: comYF
• Type: Machinery gene
• Locus tag: KIP81_RS00720
• Genome accession: NZ_CP075172
• Coordinates: 106544..106981 (+)
• Length: 145 a.a.
• NCBI ID: WP_003067903.1
• Uniprot ID: -
• Organism: Streptococcus equinus strain SheepZ001
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 101544..111981

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KIP81_RS00690 (KIP81_00690)	-	103259..103627 (+)	369	WP_021141429.1	DUF1033 family protein	-
KIP81_RS00695 (KIP81_00695)	comYA	103697..104638 (+)	942	WP_027968018.1	competence type IV pilus ATPase ComGA	Machinery gene
KIP81_RS00700 (KIP81_00700)	comYB	104562..105605 (+)	1044	WP_243603363.1	competence type IV pilus assembly protein ComGB	Machinery gene
KIP81_RS00705 (KIP81_00705)	comGC/cglC	105605..105898 (+)	294	WP_033151921.1	competence type IV pilus major pilin ComGC	Machinery gene
KIP81_RS00710 (KIP81_00710)	comGD	105882..106313 (+)	432	WP_243602941.1	competence type IV pilus minor pilin ComGD	-
KIP81_RS00715 (KIP81_00715)	comGE	106267..106560 (+)	294	WP_243602942.1	competence type IV pilus minor pilin ComGE	-
KIP81_RS00720 (KIP81_00720)	comYF	106544..106981 (+)	438	WP_003067903.1	competence type IV pilus minor pilin ComGF	Machinery gene
KIP81_RS00725 (KIP81_00725)	comGG	106968..107303 (+)	336	WP_243602943.1	competence type IV pilus minor pilin ComGG	-
KIP81_RS00730 (KIP81_00730)	comYH	107357..108313 (+)	957	WP_024344497.1	class I SAM-dependent methyltransferase	Machinery gene
KIP81_RS00735 (KIP81_00735)	-	108367..109566 (+)	1200	WP_074630168.1	acetate kinase	-
KIP81_RS00740 (KIP81_00740)	-	109724..109921 (+)	198	WP_003067896.1	helix-turn-helix transcriptional regulator	-
KIP81_RS00745 (KIP81_00745)	-	109977..110429 (+)	453	WP_243602944.1	ABC transporter permease	-
KIP81_RS00750 (KIP81_00750)	-	110441..111076 (+)	636	WP_074630166.1	type II CAAX endopeptidase family protein	-
KIP81_RS00755 (KIP81_00755)	proC	111128..111898 (-)	771	WP_045798324.1	pyrroline-5-carboxylate reductase	-

Sequence

Protein

• Length: 145 a.a.
• Molecular weight: 16620.84 Da
• Isoelectric Point: 5.2435

>NTDB_id=568224 KIP81_RS00720 WP_003067903.1 106544..106981(+) (comYF) [Streptococcus equinus strain SheepZ001]
MLRRTRLKAFTLLESLVALLVISGTVLVYQGLTQSISQNVYYLSDNEENEWLLFSQQLRSELERCHLDCVSDNKLYVSKD
DKKLAYGLSKADDFRKTNASGQGYQPMLFGVNSSSIRQDGNNILIKLRMDNGMEREFVYTFDEAS

Nucleotide

• Length: 438 bp

>NTDB_id=568224 KIP81_RS00720 WP_003067903.1 106544..106981(+) (comYF) [Streptococcus equinus strain SheepZ001]
ATGTTAAGAAGAACTAGACTAAAGGCGTTTACGTTACTTGAAAGTTTGGTTGCTTTGCTGGTTATTTCAGGGACAGTTCT
GGTTTATCAAGGGCTAACGCAGTCAATTTCACAAAATGTTTATTACTTGTCTGATAACGAAGAAAATGAGTGGCTTTTAT
TTTCTCAGCAGCTGCGCTCAGAATTAGAACGATGCCACTTAGATTGTGTTTCTGACAATAAACTTTATGTTAGTAAGGAT
GATAAGAAATTAGCTTATGGGCTATCAAAAGCAGATGATTTTCGTAAAACAAATGCTTCTGGTCAAGGCTATCAGCCAAT
GTTATTTGGTGTTAATTCTTCTAGCATTCGTCAGGATGGTAATAATATTTTGATTAAGCTGCGAATGGATAATGGTATGG
AGAGAGAGTTTGTTTACACTTTTGATGAGGCAAGTTAG

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (42-134)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comYF	Streptococcus mutans UA140	55.714	96.552	0.538
comYF	Streptococcus mutans UA159	55	96.552	0.531
comGF	Lactococcus lactis subsp. cremoris KW2	48.551	95.172	0.462
comGF/cglF	Streptococcus pneumoniae Rx1	47.101	95.172	0.448
comGF/cglF	Streptococcus pneumoniae D39	47.101	95.172	0.448
comGF/cglF	Streptococcus pneumoniae R6	47.101	95.172	0.448
comGF/cglF	Streptococcus pneumoniae TIGR4	47.101	95.172	0.448
comGF/cglF	Streptococcus mitis NCTC 12261	45.324	95.862	0.434
comGF/cglF	Streptococcus mitis SK321	44.604	95.862	0.428