Detailed information NTG0056501

Bioinformatically predicted

Overview

• Name: comFC/cflB
• Type: Machinery gene
• Locus tag: SITYG_RS02605
• Genome accession: NZ_AP014880
• Coordinates: 505245..505910 (+)
• Length: 221 a.a.
• NCBI ID: WP_003078227.1
• Uniprot ID: -
• Organism: Streptococcus intermedius strain TYG1620
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 500245..510910

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SITYG_RS10810	-	501163..501270 (+)	108	WP_231870254.1	hypothetical protein	-
SITYG_RS10785	-	501263..501536 (+)	274	Protein_479	type II toxin-antitoxin system RelE family toxin	-
SITYG_RS10310 (SITYG_04920)	-	501659..501805 (-)	147	WP_158467585.1	hypothetical protein	-
SITYG_RS02590 (SITYG_04940)	cysK	502226..503155 (-)	930	WP_096362591.1	cysteine synthase A	-
SITYG_RS02595 (SITYG_04950)	-	503255..503890 (-)	636	WP_096362592.1	YigZ family protein	-
SITYG_RS02600 (SITYG_04960)	comFA/cflA	503947..505248 (+)	1302	WP_096362593.1	DEAD/DEAH box helicase	Machinery gene
SITYG_RS02605 (SITYG_04970)	comFC/cflB	505245..505910 (+)	666	WP_003078227.1	ComF family protein	Machinery gene
SITYG_RS02610 (SITYG_04980)	hpf	505989..506531 (+)	543	WP_003073626.1	ribosome hibernation-promoting factor, HPF/YfiA family	-
SITYG_RS02615 (SITYG_04990)	rsmD	506730..507269 (+)	540	WP_048784924.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
SITYG_RS02620 (SITYG_05000)	coaD	507259..507756 (+)	498	WP_003078294.1	pantetheine-phosphate adenylyltransferase	-
SITYG_RS02625 (SITYG_05010)	sepM	507737..508792 (+)	1056	WP_003073620.1	SepM family pheromone-processing serine protease	Regulator
SITYG_RS02630 (SITYG_05020)	-	509074..509637 (+)	564	WP_096362594.1	YutD family protein	-
SITYG_RS02635 (SITYG_05030)	rlmN	509671..510753 (+)	1083	WP_096362595.1	23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	-

Sequence

Protein

• Length: 221 a.a.
• Molecular weight: 25392.34 Da
• Isoelectric Point: 7.6869

>NTDB_id=56501 SITYG_RS02605 WP_003078227.1 505245..505910(+) (comFC/cflB) [Streptococcus intermedius strain TYG1620]
MNVCVLCDNSLGEKLTFCDLLSLTKPKIRACDACFDKFQRISEQHCPKCYRDGTSEICVDCQVWLEKGKEVSHKSCFVYN
EAMKDFFSQYKFQGDYALYSVFTEILQKELKAYSDYTLVPIPVSSEKYQKRGFNQVTALLEGTKLPFREILEKYDTIAQS
SKTRKERLQSQQCFKLKDSVQPPTKVLLLDDIYTTGSTLQLAKEILVEAGVKEIMTFSLAR

Nucleotide

• Length: 666 bp

>NTDB_id=56501 SITYG_RS02605 WP_003078227.1 505245..505910(+) (comFC/cflB) [Streptococcus intermedius strain TYG1620]
ATGAATGTATGTGTTTTATGTGACAATTCTCTTGGCGAAAAACTGACATTTTGTGATTTATTGTCCTTGACTAAGCCAAA
AATAAGGGCTTGTGATGCCTGCTTTGACAAATTTCAGCGTATTTCAGAGCAGCATTGTCCTAAGTGTTATCGGGATGGAA
CAAGTGAAATCTGTGTAGATTGCCAAGTATGGCTGGAAAAAGGAAAAGAAGTTTCTCATAAAAGTTGTTTTGTTTATAAT
GAAGCTATGAAAGACTTCTTTAGTCAATATAAATTTCAAGGAGATTATGCTCTTTATTCTGTATTTACAGAGATTTTGCA
AAAAGAATTAAAAGCCTATAGCGATTATACACTTGTTCCTATTCCTGTAAGTAGTGAAAAGTACCAGAAGCGAGGCTTCA
ACCAAGTAACAGCTCTCCTTGAGGGGACAAAGTTGCCGTTTAGAGAAATTTTAGAAAAGTATGATACGATTGCTCAATCA
AGTAAGACAAGGAAGGAGCGTTTGCAAAGTCAGCAGTGTTTTAAACTGAAAGACAGTGTTCAGCCTCCGACAAAAGTTCT
TTTGCTAGATGACATTTATACGACTGGCTCAACCCTACAGTTAGCAAAGGAAATTTTAGTGGAAGCGGGAGTGAAAGAAA
TTATGACATTTTCATTGGCAAGGTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC/cflB	Streptococcus mitis SK321	48.165	98.643	0.475
comFC/cflB	Streptococcus pneumoniae TIGR4	47.248	98.643	0.466
comFC/cflB	Streptococcus mitis NCTC 12261	46.789	98.643	0.462
comFC/cflB	Streptococcus pneumoniae Rx1	46.789	98.643	0.462
comFC/cflB	Streptococcus pneumoniae D39	46.789	98.643	0.462
comFC/cflB	Streptococcus pneumoniae R6	46.789	98.643	0.462