Detailed information NTG0564675

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: MCU78_RS27720
• Genome accession: NZ_CP092051
• Coordinates: 6279698..6281047 (+)
• Length: 449 a.a.
• NCBI ID: WP_185943552.1
• Uniprot ID: -
• Organism: Streptomyces sp. TYQ1024
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 6274698..6286047

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MCU78_RS27700 (MCU78_27700)	-	6275846..6276712 (-)	867	WP_185943556.1	peptidylprolyl isomerase	-
MCU78_RS27705 (MCU78_27705)	-	6276904..6277623 (+)	720	WP_185943555.1	MBL fold metallo-hydrolase	-
MCU78_RS27710 (MCU78_27710)	hisS	6277634..6278896 (+)	1263	WP_185943554.1	histidine--tRNA ligase	-
MCU78_RS27715 (MCU78_27715)	-	6278955..6279614 (+)	660	WP_185943553.1	vitamin K epoxide reductase family protein	-
MCU78_RS27720 (MCU78_27720)	rarA	6279698..6281047 (+)	1350	WP_185943552.1	replication-associated recombination protein A	Machinery gene
MCU78_RS27725 (MCU78_27725)	-	6281265..6281966 (-)	702	WP_185946174.1	DUF2470 domain-containing protein	-
MCU78_RS27730 (MCU78_27730)	rpsD	6282155..6282769 (+)	615	WP_185946175.1	30S ribosomal protein S4	-
MCU78_RS27735 (MCU78_27735)	-	6282963..6283409 (+)	447	WP_185946176.1	DUF948 domain-containing protein	-
MCU78_RS27740 (MCU78_27740)	-	6283417..6283749 (+)	333	WP_185946177.1	DUF6167 family protein	-

Sequence

Protein

• Length: 449 a.a.
• Molecular weight: 47944.19 Da
• Isoelectric Point: 5.9553

>NTDB_id=564675 MCU78_RS27720 WP_185943552.1 6279698..6281047(+) (rarA) [Streptomyces sp. TYQ1024]
MEPDLFTAAEEDRREKDPSSSPLAVRMRPRTLDEVVGQGHLLKPGSPLRRLVGEASGGPAGPSSVILWGPPGIGKTTLAY
VVSQATNKRFVELSAITAGVKEVRAVIDGARRASGGYGKETVLFLDEIHRFSKAQQDSLLPAVENRWVTLIAATTENPYF
SIISPLLSRSLLLTLQALTDDDLRGLLHRAVEDERGLGGAVTLPEDAEAHLLRIAGGDARRALTALEAAAGAALDKGEGE
ITLETLEETVDRAAVKYDRDGDQHYDVASALIKSIRGSDVDATLHYLARMIEAGEDPRFIARRLMISASEDIGLADPSAL
QTAVAGAQAVAMIGFPEARITLSQVAIALALAPKSNAAYLAIDAALADVRGGMAGPVPPHLRDGHYKGAAKLGHGEGYQY
PHDLPGGIAAQQYAPDAVHGRRYYSPTRHGAESRYADVVERVRERLRGE

Nucleotide

• Length: 1350 bp

>NTDB_id=564675 MCU78_RS27720 WP_185943552.1 6279698..6281047(+) (rarA) [Streptomyces sp. TYQ1024]
GTGGAACCCGACCTGTTCACCGCCGCAGAAGAGGACCGCCGGGAGAAAGACCCGTCGAGCAGTCCCCTGGCCGTCCGCAT
GCGCCCCCGCACCCTCGACGAGGTCGTCGGACAGGGCCATCTGCTGAAGCCCGGGTCGCCGCTGCGCCGGCTGGTCGGCG
AGGCGAGCGGCGGGCCGGCCGGGCCCTCGTCGGTGATCCTCTGGGGGCCGCCCGGCATCGGCAAGACGACCCTCGCGTAC
GTCGTCAGCCAGGCCACCAACAAGCGCTTCGTCGAGCTGTCCGCGATCACCGCCGGCGTCAAGGAGGTCCGGGCCGTCAT
CGACGGCGCCCGCCGGGCCTCCGGCGGCTACGGCAAGGAGACCGTCCTCTTCCTCGACGAGATCCACCGCTTCAGCAAGG
CCCAGCAGGACTCCCTGCTGCCCGCCGTCGAGAACCGCTGGGTCACTCTGATCGCCGCCACCACCGAGAACCCCTACTTC
TCGATCATCTCCCCGCTGCTCTCCCGATCCCTGCTACTCACCCTCCAGGCGCTCACCGACGACGACCTGCGCGGACTGCT
GCACCGGGCGGTAGAGGACGAGCGCGGGCTCGGCGGCGCGGTCACGCTCCCCGAGGACGCGGAGGCACACCTGCTGCGGA
TCGCCGGCGGCGACGCGCGGCGGGCGCTCACCGCCCTGGAGGCGGCGGCGGGGGCGGCGCTCGACAAGGGCGAGGGCGAG
ATCACCCTGGAGACGCTGGAGGAGACGGTCGACCGGGCCGCGGTGAAGTACGACCGCGACGGGGACCAGCATTACGACGT
CGCGAGTGCGTTGATCAAGTCGATTCGCGGGTCGGATGTGGATGCCACTCTCCATTACCTGGCCCGGATGATCGAGGCGG
GAGAGGATCCTCGGTTCATCGCGCGGCGGTTGATGATCTCCGCCAGTGAGGACATCGGGCTCGCGGATCCTTCCGCGCTG
CAGACGGCGGTTGCCGGGGCACAGGCCGTCGCCATGATCGGTTTCCCCGAGGCGCGGATCACTCTTTCGCAGGTGGCGAT
CGCGTTGGCGCTGGCGCCGAAGTCGAACGCGGCTTATCTCGCCATCGACGCGGCGCTCGCCGATGTGCGGGGTGGGATGG
CCGGGCCGGTGCCTCCGCATCTGCGGGACGGGCATTACAAGGGGGCCGCGAAGCTGGGGCATGGGGAGGGGTATCAGTAT
CCCCATGATCTGCCGGGTGGGATCGCGGCTCAGCAGTATGCGCCTGATGCGGTGCATGGGCGGCGGTATTACTCGCCTAC
TCGGCATGGGGCGGAGTCGCGGTACGCGGATGTGGTGGAGCGGGTGCGGGAGCGTTTGCGGGGGGAGTGA

Domains

Predicted by InterProScan.

• MgsA AAA+ ATPase C terminal (MgsA_C) (277-442)

• AAA C-terminal domain (AAA_assoc_2) (200-276)

• ATPase family associated with various cellular activities (AAA) (AAA) (65-169)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	45.116	95.768	0.432