Detailed information NTG0558001

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: KCG52_RS06285
• Genome accession: NZ_CP073114
• Coordinates: 1324135..1325325 (+)
• Length: 396 a.a.
• NCBI ID: WP_254343407.1
• Uniprot ID: -
• Organism: Neisseria subflava strain HP0048
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1319135..1330325

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KCG52_RS06270 (KCG52_06250)	-	1319917..1320510 (+)	594	WP_003749237.1	DUF4390 domain-containing protein	-
KCG52_RS06275 (KCG52_06255)	-	1320514..1322640 (+)	2127	WP_254343403.1	PAS domain-containing sensor histidine kinase	-
KCG52_RS06280 (KCG52_06260)	-	1322627..1323901 (+)	1275	WP_254343405.1	sigma-54 dependent transcriptional regulator	-
KCG52_RS06285 (KCG52_06265)	dprA	1324135..1325325 (+)	1191	WP_254343407.1	DNA-processing protein DprA	Machinery gene
KCG52_RS06290 (KCG52_06270)	-	1325350..1325805 (+)	456	WP_003749244.1	DUF494 family protein	-
KCG52_RS06295 (KCG52_06275)	topA	1325879..1328185 (+)	2307	WP_254343410.1	type I DNA topoisomerase	-
KCG52_RS06300 (KCG52_06280)	rsmD	1328335..1328907 (+)	573	WP_254343411.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
KCG52_RS06305 (KCG52_06285)	-	1329030..1329281 (+)	252	WP_003679513.1	YfhL family 4Fe-4S dicluster ferredoxin	-

Sequence

Protein

• Length: 396 a.a.
• Molecular weight: 42729.83 Da
• Isoelectric Point: 5.8838

>NTDB_id=558001 KCG52_RS06285 WP_254343407.1 1324135..1325325(+) (dprA) [Neisseria subflava strain HP0048]
MTENERFAWLQLAFTPYIGAESFLVLLQQFGSAQAALNAPVDKIAALVRHKQAAESWRNADKRALAQQSAEAALQWEMQD
GCRLLLLQDDDFPEMLTQGITAPPVLFLRGNAELLHTPSAAIVGSRHATPQAMRIAKDFGRALSEKGIPVVSGMASGIDT
AAHQGALQADGGTIAVWGTGIDRIYPPSNKNLAYEIAEKGLIVSEFPLDTRPFAGNFPRRNRLIAALSQLTLVVEAALES
GSLITAKLAAEMGREVMAVPGSIDNPHSKGCHKLIKDGAKLVECLDDILHECPQLLQNTPVPSYSINKTVKPKNDQIKRL
QPKTIADEPQRPSENPPAAPSTSALLEAMGYDPIHPDILAQQTNTAAADVYAQLLEYELDGIVAALPGGRYQRVKA

Nucleotide

• Length: 1191 bp

>NTDB_id=558001 KCG52_RS06285 WP_254343407.1 1324135..1325325(+) (dprA) [Neisseria subflava strain HP0048]
ATGACGGAAAACGAGCGTTTTGCTTGGTTGCAACTGGCATTTACGCCCTATATCGGCGCAGAAAGTTTTTTGGTGCTGTT
GCAGCAATTCGGTAGCGCACAAGCTGCCTTGAATGCGCCGGTAGACAAAATTGCCGCCCTGGTACGCCATAAACAGGCGG
CCGAGTCATGGCGCAATGCGGACAAACGGGCTTTGGCGCAGCAGTCTGCCGAAGCCGCTTTACAATGGGAAATGCAGGAC
GGTTGCCGTCTGTTGCTGCTGCAAGATGATGATTTCCCCGAAATGCTGACGCAAGGCATTACCGCGCCGCCGGTCTTGTT
TTTACGCGGCAATGCAGAGTTGTTGCACACGCCTTCTGCCGCGATTGTCGGCAGCCGCCATGCCACGCCGCAGGCCATGC
GGATTGCCAAAGATTTCGGCAGAGCGTTGAGTGAAAAAGGCATTCCCGTCGTATCGGGTATGGCTTCGGGTATCGATACT
GCCGCACATCAAGGCGCATTGCAGGCAGATGGCGGCACCATCGCCGTCTGGGGAACCGGTATAGACCGCATTTATCCGCC
GTCCAATAAAAACCTTGCTTATGAAATCGCTGAAAAAGGATTGATTGTCAGCGAGTTTCCTTTGGACACGCGCCCGTTTG
CAGGCAATTTTCCTCGCCGCAACCGTCTGATTGCCGCGTTGTCGCAGCTGACATTGGTGGTTGAGGCGGCATTGGAATCC
GGCTCATTGATTACTGCCAAGCTGGCGGCGGAGATGGGGCGCGAAGTGATGGCGGTGCCCGGTTCGATAGACAATCCGCA
CAGCAAAGGCTGCCACAAGCTGATTAAAGATGGGGCAAAATTGGTGGAATGTTTGGACGATATTCTTCACGAATGTCCGC
AGCTATTGCAAAATACGCCTGTTCCATCATATTCTATAAATAAGACGGTAAAACCCAAAAACGACCAAATCAAACGTCTG
CAACCCAAAACAATAGCGGATGAACCGCAAAGGCCGTCTGAAAACCCTCCTGCCGCCCCATCGACAAGCGCTTTATTGGA
AGCAATGGGTTACGACCCGATACACCCCGATATTTTGGCGCAACAAACCAATACGGCAGCGGCAGACGTGTACGCACAGC
TTTTGGAATACGAACTTGACGGTATCGTTGCTGCCTTACCGGGCGGCCGTTATCAGCGTGTTAAAGCATAA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (79-283)

• DprA winged helix domain (DprA_WH) (331-389)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Neisseria meningitidis strain C311	77.5	100	0.783
dprA	Neisseria meningitidis MC58	77.5	100	0.783
dprA	Neisseria gonorrhoeae MS11	76.826	100	0.77
dprA	Neisseria gonorrhoeae strain FA1090	76.322	100	0.765
dprA	Vibrio cholerae strain A1552	38.579	99.495	0.384
dprA	Vibrio campbellii strain DS40M4	37.468	97.727	0.366
dprA	Glaesserella parasuis strain SC1401	42.56	84.848	0.361