Detailed information NTG0553393

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: J7U05_RS04320
• Genome accession: NZ_CP072443
• Coordinates: 820863..821702 (+)
• Length: 279 a.a.
• NCBI ID: WP_116920213.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus strain S24724
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 815863..826702

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J7U05_RS04290 (J7U05_04295)	-	816278..816805 (+)	528	WP_041827017.1	ECF transporter S component	-
J7U05_RS04295 (J7U05_04300)	-	816829..817344 (+)	516	WP_011225884.1	transcription repressor NadR	-
J7U05_RS04300 (J7U05_04305)	-	817439..818128 (+)	690	WP_046206437.1	helix-turn-helix transcriptional regulator	-
J7U05_RS04305 (J7U05_04310)	ylqF	818256..819110 (+)	855	WP_011681084.1	ribosome biogenesis GTPase YlqF	-
J7U05_RS04310 (J7U05_04315)	-	819097..819864 (+)	768	WP_116920212.1	ribonuclease HII	-
J7U05_RS04315 (J7U05_04320)	-	819875..820795 (+)	921	WP_014608255.1	ROK family protein	-
J7U05_RS04320 (J7U05_04325)	dprA	820863..821702 (+)	840	WP_116920213.1	DNA-processing protein DprA	Machinery gene
J7U05_RS04325 (J7U05_04330)	topA	821870..824014 (+)	2145	WP_064355758.1	type I DNA topoisomerase	-
J7U05_RS04330 (J7U05_04335)	-	824131..824955 (+)	825	WP_095559343.1	TraX family protein	-
J7U05_RS04335 (J7U05_04340)	-	824992..825651 (+)	660	WP_011227158.1	response regulator transcription factor	-

Sequence

Protein

• Length: 279 a.a.
• Molecular weight: 31260.22 Da
• Isoelectric Point: 8.4536

>NTDB_id=553393 J7U05_RS04320 WP_116920213.1 820863..821702(+) (dprA) [Streptococcus thermophilus strain S24724]
MNNFELFKLKAAGLTNLNILNILDYQKNQDKKLSLRDMAVVSKSKNAVLFMEKYKNLDVKQLKEDFQRFPTLSIFDKEYP
IELKHSYNPPVLLFYQGNIDLLSKPKLAVVGARKCSETGKQSVRKIVHELGNAFTIVSGLASGIDTCAHMEALKNRGNTI
AVIGTGLDVYYPKENKALQDYMIKNHLVLTEYGPGEQPLKYHFPERNRIISGLCQGVMVVEAKLRSGSLITCERAMEEGR
DVFVIPGNILDGKSDGCHHLIQEGAKCITTGFDIISEFS

Nucleotide

• Length: 840 bp

>NTDB_id=553393 J7U05_RS04320 WP_116920213.1 820863..821702(+) (dprA) [Streptococcus thermophilus strain S24724]
ATGAATAACTTTGAACTTTTTAAACTAAAAGCTGCTGGATTGACGAATTTAAACATCCTTAACATTTTAGACTATCAAAA
AAATCAAGATAAAAAATTGAGCTTACGTGATATGGCAGTGGTATCTAAGTCTAAAAATGCCGTTCTCTTTATGGAAAAAT
ACAAGAATTTAGATGTTAAGCAGCTTAAGGAAGATTTTCAACGTTTTCCGACCTTATCAATTTTTGATAAGGAGTATCCC
ATTGAGCTGAAACATTCCTATAATCCTCCTGTCCTCCTCTTTTATCAAGGGAATATTGATTTGCTAAGTAAACCCAAGTT
AGCAGTAGTTGGTGCCAGAAAGTGTTCTGAAACAGGCAAACAGTCTGTTCGAAAAATTGTTCATGAACTTGGGAATGCCT
TTACTATTGTAAGTGGCTTAGCGAGTGGAATTGATACTTGTGCTCATATGGAGGCCTTAAAAAATAGAGGTAACACCATT
GCAGTTATCGGGACTGGACTAGACGTATATTATCCTAAAGAAAACAAAGCTTTACAGGACTATATGATTAAAAATCATTT
AGTTCTTACAGAATACGGACCGGGTGAACAGCCACTTAAATACCATTTTCCTGAACGAAATCGGATAATTTCTGGATTGT
GTCAAGGGGTTATGGTGGTTGAAGCCAAGCTTCGCTCGGGAAGTCTTATTACTTGTGAGCGTGCAATGGAAGAAGGAAGA
GATGTTTTCGTCATACCAGGAAATATTTTAGATGGAAAATCGGATGGATGCCATCACCTCATTCAAGAGGGCGCAAAGTG
CATTACTACAGGATTTGACATCATTTCAGAATTTTCATAA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (71-269)

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (1-62)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Streptococcus mutans UA159	72.043	100	0.72
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	63.309	99.642	0.631
dprA/cilB/dalA	Streptococcus pneumoniae D39	63.309	99.642	0.631
dprA/cilB/dalA	Streptococcus pneumoniae R6	63.309	99.642	0.631
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	63.309	99.642	0.631
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	62.95	99.642	0.627
dprA/cilB/dalA	Streptococcus mitis SK321	62.95	99.642	0.627
dprA	Lactococcus lactis subsp. cremoris KW2	59.712	99.642	0.595
dprA	Latilactobacillus sakei subsp. sakei 23K	39.382	92.832	0.366