Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   J7T60_RS09450 Genome accession   NZ_CP072436
Coordinates   1794541..1795776 (+) Length   411 a.a.
NCBI ID   WP_179971114.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain S24735     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1789541..1800776
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J7T60_RS09420 (J7T60_09330) - 1790007..1792613 (+) 2607 WP_179971113.1 YfhO family protein -
  J7T60_RS09440 (J7T60_09350) - 1793158..1793841 (-) 684 WP_164178359.1 YoaK family protein -
  J7T60_RS09445 (J7T60_09355) rlmH 1793857..1794336 (-) 480 WP_002952297.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  J7T60_RS09450 (J7T60_09360) htrA 1794541..1795776 (+) 1236 WP_179971114.1 S1C family serine protease Regulator
  J7T60_RS09455 (J7T60_09365) spo0J 1795842..1796609 (+) 768 WP_179971115.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 411 a.a.        Molecular weight: 42854.15 Da        Isoelectric Point: 4.7654

>NTDB_id=553014 J7T60_RS09450 WP_179971114.1 1794541..1795776(+) (htrA) [Streptococcus thermophilus strain S24735]
MKKFNWKKIVAPIAILIIGLLGGLLGAFILLTAAGVSFTNTTDTGVKTAKTVYTNITDTTKAVKKVQNAVVSVINYQEGS
SSDSLNDLYGRIFGGGNSSDSSQENSKDSDGLQVAGEGSGVIYKKDGKEAYIVTNNHVVDGAKKLEIMLSDGSKITGELV
GKDTYSDLAVVKLSSDKITTVAEFADSNSLTVGEKAIAIGSPLGTEYANSVTEGIVSSLSRTITMQNDNGETVSTNAIQT
DAAINPGNSGGALVNIEGQVIGINSSKISSTSAVAGSAVEGMGFAIPSNDVVEIINQLEKDGKVTRPALGISIADLNSLS
SSATSKLDLPDEVKSGVVVGSVQKGMPADGKLQEYDVITEIDGKKISSKTDIQTNLYSHSIGDTIKVTFYRGKDKKTVDL
KLTKSTEDISD

Nucleotide


Download         Length: 1236 bp        

>NTDB_id=553014 J7T60_RS09450 WP_179971114.1 1794541..1795776(+) (htrA) [Streptococcus thermophilus strain S24735]
ATGAAAAAATTTAACTGGAAGAAAATAGTCGCGCCAATTGCAATACTAATTATTGGCTTACTAGGTGGTTTACTTGGTGC
CTTTATCCTACTAACAGCAGCCGGGGTATCTTTTACCAATACAACAGATACTGGAGTAAAAACGGCTAAGACCGTCTACA
CCAATATAACAGATACAACTAAGGCTGTTAAGAAAGTACAAAATGCCGTTGTTTCTGTCATCAATTATCAAGAAGGTTCA
TCTTCAGATTCTCTAAATGACCTTTATGGCCGTATCTTTGGCGGAGGGAACAGTTCTGATTCTAGCCAAGAAAATTCAAA
AGATTCAGATGGTCTACAGGTCGCTGGTGAAGGTTCTGGAGTCATCTATAAAAAAGATGGCAAAGAAGCCTACATCGTAA
CCAATAACCATGTTGTCGATGGGGCTAAAAAACTTGAAATCATGCTTTCGGATGGTTCGAAAATTACTGGTGAACTTGTT
GGTAAAGACACTTACTCTGACCTAGCAGTTGTCAAATTATCTTCAGATAAAATAACAACTGTTGCAGAATTTGCAGACTC
AAACTCCCTTACTGTTGGTGAAAAAGCAATTGCTATCGGTAGCCCACTTGGTACCGAATACGCCAACTCAGTAACAGAAG
GAATCGTTTCTAGCCTTAGCCGTACTATAACGATGCAAAACGATAATGGTGAAACTGTATCAACAAACGCTATCCAAACA
GATGCAGCCATTAACCCTGGTAACTCTGGTGGTGCCCTAGTCAATATTGAAGGACAAGTTATCGGTATTAATTCAAGTAA
AATTTCATCAACGTCTGCAGTCGCTGGTAGTGCTGTTGAAGGTATGGGGTTTGCCATTCCATCAAACGATGTTGTTGAAA
TCATCAATCAATTAGAAAAAGATGGTAAAGTTACACGACCAGCACTAGGGATCTCAATAGCAGATCTTAATAGCCTTTCT
AGCAGCGCAACTTCTAAATTAGATTTACCAGATGAGGTCAAATCCGGTGTTGTTGTCGGTAGTGTTCAGAAAGGTATGCC
AGCTGACGGTAAACTTCAAGAATATGATGTTATCACTGAGATTGATGGTAAGAAAATCAGCTCAAAAACTGATATTCAAA
CCAATCTTTACAGCCATAGTATTGGAGATACTATCAAGGTAACCTTCTATCGTGGTAAAGATAAGAAAACTGTAGATCTT
AAATTAACAAAATCTACAGAAGACATATCTGATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

59.854

100

0.599

  htrA Streptococcus gordonii str. Challis substr. CH1

56.796

100

0.569

  htrA Streptococcus mitis NCTC 12261

53.301

99.513

0.53

  htrA Streptococcus pneumoniae TIGR4

53.056

99.513

0.528

  htrA Streptococcus pneumoniae D39

53.056

99.513

0.528

  htrA Streptococcus pneumoniae Rx1

53.056

99.513

0.528

  htrA Streptococcus pneumoniae R6

53.056

99.513

0.528