Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   J7T60_RS09455 Genome accession   NZ_CP072436
Coordinates   1795842..1796609 (+) Length   255 a.a.
NCBI ID   WP_179971115.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain S24735     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1790842..1801609
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J7T60_RS09440 (J7T60_09350) - 1793158..1793841 (-) 684 WP_164178359.1 YoaK family protein -
  J7T60_RS09445 (J7T60_09355) rlmH 1793857..1794336 (-) 480 WP_002952297.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  J7T60_RS09450 (J7T60_09360) htrA 1794541..1795776 (+) 1236 WP_179971114.1 S1C family serine protease Regulator
  J7T60_RS09455 (J7T60_09365) spo0J 1795842..1796609 (+) 768 WP_179971115.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 255 a.a.        Molecular weight: 29420.79 Da        Isoelectric Point: 9.8619

>NTDB_id=553015 J7T60_RS09455 WP_179971115.1 1795842..1796609(+) (spo0J) [Streptococcus thermophilus strain S24735]
MSEQLKTLSISEIHPNPFQPRLKFSDEELVELSQSISENGLIQPIIVRKSDIIGYELIAGERRLRACKRLGMTEIPAVVK
EVTDQESRKQAIIENLQRSNLNPIEEAKAYRNLIDELTYSHEELAKAMGKSRPYISNALRLLQLPREIQTSIENGSLSQG
HARALLAIEDSRKQLTIFQQVVAERWSVRTLEKKLQQLPRKQKSKKDTHVKDKEKELERSLGLPITLRYHKNHSGTIQIH
FSTEEDFNRIINKLI

Nucleotide


Download         Length: 768 bp        

>NTDB_id=553015 J7T60_RS09455 WP_179971115.1 1795842..1796609(+) (spo0J) [Streptococcus thermophilus strain S24735]
ATGTCAGAACAACTCAAAACTTTATCTATTAGTGAAATTCACCCCAATCCTTTTCAACCTCGTCTAAAATTCTCCGATGA
AGAGTTAGTAGAACTAAGTCAATCAATATCAGAAAATGGTTTAATACAGCCAATTATTGTACGAAAATCTGACATTATTG
GTTATGAACTAATTGCTGGAGAAAGACGTTTACGAGCCTGTAAACGTTTAGGGATGACAGAAATCCCTGCAGTTGTAAAG
GAAGTTACAGATCAAGAGAGTCGTAAACAAGCTATTATTGAAAATCTACAACGATCAAATCTCAATCCTATTGAAGAAGC
AAAGGCCTATCGTAATTTAATTGATGAGTTAACTTATAGTCACGAGGAGCTCGCTAAAGCTATGGGAAAATCTAGACCAT
ATATTAGTAACGCTCTTAGACTACTACAACTTCCGCGAGAGATACAAACGAGTATTGAAAACGGAAGTCTGAGTCAGGGA
CATGCTAGAGCACTCTTAGCTATTGAGGATTCTCGAAAGCAGTTAACCATCTTTCAGCAGGTTGTGGCTGAAAGATGGTC
TGTTCGTACTCTAGAAAAAAAACTTCAGCAACTTCCTAGAAAACAAAAATCTAAAAAAGATACCCATGTAAAAGATAAAG
AAAAAGAACTTGAAAGATCACTAGGTCTCCCCATAACTCTACGTTATCACAAAAATCACTCAGGAACGATTCAAATACAC
TTTTCGACAGAAGAAGATTTTAACAGAATTATCAACAAGCTTATCTAA

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(147-196)

ParB/Sulfiredoxin domain (ParB_N)

(8-95)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

56.863

100

0.569