Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | CRI9333_RS05585 | Genome accession | NC_019753 |
| Coordinates | 1302352..1302717 (-) | Length | 121 a.a. |
| NCBI ID | WP_015202186.1 | Uniprot ID | K9VWZ6 |
| Organism | Crinalium epipsammum PCC 9333 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1297352..1307717
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CRI9333_RS05565 (Cri9333_1155) | - | 1297710..1298726 (+) | 1017 | WP_015202182.1 | sulfate/molybdate ABC transporter ATP-binding protein | - |
| CRI9333_RS05570 (Cri9333_1156) | - | 1298996..1300639 (+) | 1644 | WP_015202183.1 | ABC transporter substrate-binding protein | - |
| CRI9333_RS05575 (Cri9333_1157) | - | 1300825..1301106 (+) | 282 | WP_015202184.1 | antibiotic biosynthesis monooxygenase | - |
| CRI9333_RS05580 (Cri9333_1158) | - | 1301262..1302287 (+) | 1026 | WP_015202185.1 | ABC transporter permease | - |
| CRI9333_RS05585 (Cri9333_1159) | pilH | 1302352..1302717 (-) | 366 | WP_015202186.1 | response regulator transcription factor | Machinery gene |
| CRI9333_RS05590 (Cri9333_1160) | - | 1303331..1303642 (-) | 312 | WP_015202187.1 | WGxxGxxG family protein | - |
| CRI9333_RS05595 (Cri9333_1161) | - | 1303930..1305147 (-) | 1218 | WP_015202188.1 | lipopolysaccharide assembly protein LapB | - |
| CRI9333_RS05600 (Cri9333_1162) | - | 1305215..1306465 (+) | 1251 | WP_015202189.1 | esterase-like activity of phytase family protein | - |
| CRI9333_RS05605 (Cri9333_1163) | - | 1306526..1307116 (+) | 591 | WP_015202190.1 | chromophore lyase CpcT/CpeT | - |
Sequence
Protein
Download Length: 121 a.a. Molecular weight: 13876.37 Da Isoelectric Point: 5.2061
>NTDB_id=54955 CRI9333_RS05585 WP_015202186.1 1302352..1302717(-) (pilH) [Crinalium epipsammum PCC 9333]
MSTILVVDDSGMLREMVSELLKKSGMTVILANDGLEGKEQLENMIPDLVITDLIMPRMNGYELCRWIKGNPKLQNLPVIM
CSTKNEDFDRYWGMKQGADAYITKPFHPVEMLETIKQLLRK
MSTILVVDDSGMLREMVSELLKKSGMTVILANDGLEGKEQLENMIPDLVITDLIMPRMNGYELCRWIKGNPKLQNLPVIM
CSTKNEDFDRYWGMKQGADAYITKPFHPVEMLETIKQLLRK
Nucleotide
Download Length: 366 bp
>NTDB_id=54955 CRI9333_RS05585 WP_015202186.1 1302352..1302717(-) (pilH) [Crinalium epipsammum PCC 9333]
ATGAGTACAATTTTGGTTGTCGATGATAGTGGTATGCTCAGAGAGATGGTGTCAGAACTCCTTAAAAAGAGCGGAATGAC
TGTAATTCTCGCAAATGATGGGTTAGAAGGAAAAGAACAACTTGAAAATATGATTCCAGATTTAGTAATTACAGATCTGA
TCATGCCTCGGATGAATGGCTATGAACTTTGCCGTTGGATTAAAGGCAACCCCAAATTGCAAAATCTCCCTGTAATCATG
TGTTCCACAAAAAACGAAGATTTTGATCGTTACTGGGGAATGAAGCAAGGGGCAGATGCCTACATTACCAAACCTTTTCA
TCCAGTAGAAATGCTGGAAACAATAAAACAACTGCTACGCAAGTAG
ATGAGTACAATTTTGGTTGTCGATGATAGTGGTATGCTCAGAGAGATGGTGTCAGAACTCCTTAAAAAGAGCGGAATGAC
TGTAATTCTCGCAAATGATGGGTTAGAAGGAAAAGAACAACTTGAAAATATGATTCCAGATTTAGTAATTACAGATCTGA
TCATGCCTCGGATGAATGGCTATGAACTTTGCCGTTGGATTAAAGGCAACCCCAAATTGCAAAATCTCCCTGTAATCATG
TGTTCCACAAAAAACGAAGATTTTGATCGTTACTGGGGAATGAAGCAAGGGGCAGATGCCTACATTACCAAACCTTTTCA
TCCAGTAGAAATGCTGGAAACAATAAAACAACTGCTACGCAAGTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
60.833 |
99.174 |
0.603 |
| pilG | Acinetobacter baumannii strain A118 |
41.593 |
93.388 |
0.388 |
| vicR | Streptococcus mutans UA159 |
38.017 |
100 |
0.38 |
| pilL-C | Synechocystis sp. PCC 6803 |
38.136 |
97.521 |
0.372 |
| micA | Streptococcus pneumoniae Cp1015 |
37.19 |
100 |
0.372 |
| chpA | Acinetobacter baumannii strain A118 |
38.793 |
95.868 |
0.372 |