Detailed information
Bioinformatically predicted
Overview
| Name | rcrQ | Type | Regulator |
| Locus tag | SYN7502_RS21440 | Genome accession | NC_019702 |
| Coordinates | 2710976..2711293 (+) | Length | 105 a.a. |
| NCBI ID | WP_041429488.1 | Uniprot ID | - |
| Organism | Synechococcus sp. PCC 7502 | ||
| Function | regulate competence (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2705976..2716293
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SYN7502_RS13480 (Syn7502_02739) | - | 2706339..2706794 (+) | 456 | WP_246828920.1 | MAPEG family protein | - |
| SYN7502_RS13485 (Syn7502_02740) | - | 2706844..2708022 (+) | 1179 | WP_015169340.1 | Era-like GTP-binding protein | - |
| SYN7502_RS19425 (Syn7502_02741) | - | 2708019..2709854 (-) | 1836 | WP_015169341.1 | pentapeptide repeat-containing protein | - |
| SYN7502_RS21435 (Syn7502_02742) | - | 2710267..2710974 (+) | 708 | WP_371257772.1 | IS982 family transposase | - |
| SYN7502_RS21440 (Syn7502_02743) | rcrQ | 2710976..2711293 (+) | 318 | WP_041429488.1 | ATP-binding cassette domain-containing protein | Regulator |
| SYN7502_RS19010 (Syn7502_02744) | - | 2711384..2711563 (+) | 180 | WP_071880371.1 | IS5 family transposase | - |
| SYN7502_RS20685 (Syn7502_02745) | - | 2711543..2712109 (-) | 567 | WP_015167904.1 | IS630 family transposase | - |
| SYN7502_RS20690 | - | 2712087..2712326 (-) | 240 | WP_210391291.1 | winged helix-turn-helix domain-containing protein | - |
| SYN7502_RS20695 | - | 2712323..2712610 (-) | 288 | WP_210391292.1 | helix-turn-helix domain-containing protein | - |
| SYN7502_RS19835 | - | 2712594..2712839 (+) | 246 | WP_144050221.1 | transposase | - |
| SYN7502_RS13515 (Syn7502_02747) | - | 2712793..2713377 (+) | 585 | WP_371257773.1 | transposase | - |
| SYN7502_RS13520 | - | 2713683..2713955 (+) | 273 | WP_041429490.1 | hypothetical protein | - |
| SYN7502_RS21445 | - | 2714007..2714147 (+) | 141 | Protein_2759 | hypothetical protein | - |
| SYN7502_RS13525 (Syn7502_02749) | - | 2714199..2714432 (-) | 234 | WP_015169342.1 | RNA-binding S4 domain-containing protein | - |
| SYN7502_RS13530 (Syn7502_02750) | - | 2714425..2714787 (-) | 363 | WP_015169343.1 | cupin domain-containing protein | - |
| SYN7502_RS13535 (Syn7502_02751) | - | 2715005..2715475 (-) | 471 | WP_371257774.1 | transposase | - |
| SYN7502_RS19025 | - | 2715429..2715740 (-) | 312 | WP_071880372.1 | transposase | - |
| SYN7502_RS18415 | - | 2715842..2716174 (+) | 333 | WP_051023633.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 105 a.a. Molecular weight: 11610.29 Da Isoelectric Point: 6.4806
>NTDB_id=54841 SYN7502_RS21440 WP_041429488.1 2710976..2711293(+) (rcrQ) [Synechococcus sp. PCC 7502]
MSGGQRQRLGIARALLVEPDVLIFDEATSSLDYESERAIQLAMSQLQGTRTMIIIAHRLSTVREADKIVVLDQGKIAEVG
SHQALLAQNGIYHRLHSLQESPSFI
MSGGQRQRLGIARALLVEPDVLIFDEATSSLDYESERAIQLAMSQLQGTRTMIIIAHRLSTVREADKIVVLDQGKIAEVG
SHQALLAQNGIYHRLHSLQESPSFI
Nucleotide
Download Length: 318 bp
>NTDB_id=54841 SYN7502_RS21440 WP_041429488.1 2710976..2711293(+) (rcrQ) [Synechococcus sp. PCC 7502]
ATGTCGGGAGGACAAAGACAAAGACTAGGAATTGCTAGGGCTTTATTAGTGGAGCCAGATGTTTTGATCTTTGATGAGGC
AACGTCAAGTTTAGATTATGAATCCGAACGAGCAATTCAGCTAGCAATGAGCCAATTACAAGGGACAAGAACCATGATTA
TTATTGCCCATCGCCTGAGTACAGTGCGGGAGGCTGATAAAATTGTGGTACTAGATCAGGGCAAAATTGCAGAAGTGGGA
AGCCATCAGGCACTTCTAGCCCAAAATGGTATTTATCACCGCCTGCACTCTCTTCAGGAATCCCCAAGTTTTATCTAA
ATGTCGGGAGGACAAAGACAAAGACTAGGAATTGCTAGGGCTTTATTAGTGGAGCCAGATGTTTTGATCTTTGATGAGGC
AACGTCAAGTTTAGATTATGAATCCGAACGAGCAATTCAGCTAGCAATGAGCCAATTACAAGGGACAAGAACCATGATTA
TTATTGCCCATCGCCTGAGTACAGTGCGGGAGGCTGATAAAATTGTGGTACTAGATCAGGGCAAAATTGCAGAAGTGGGA
AGCCATCAGGCACTTCTAGCCCAAAATGGTATTTATCACCGCCTGCACTCTCTTCAGGAATCCCCAAGTTTTATCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rcrQ | Streptococcus mutans UA159 |
53.535 |
94.286 |
0.505 |
| comA | Streptococcus pneumoniae R6 |
54.737 |
90.476 |
0.495 |
| comA | Streptococcus mitis NCTC 12261 |
54.737 |
90.476 |
0.495 |
| comA | Streptococcus pneumoniae Rx1 |
54.737 |
90.476 |
0.495 |
| comA | Streptococcus pneumoniae D39 |
54.737 |
90.476 |
0.495 |
| comA | Streptococcus pneumoniae TIGR4 |
54.737 |
90.476 |
0.495 |
| comA | Streptococcus mitis SK321 |
52.632 |
90.476 |
0.476 |
| comA | Streptococcus gordonii str. Challis substr. CH1 |
51.579 |
90.476 |
0.467 |
| comA/nlmT | Streptococcus mutans UA159 |
49.485 |
92.381 |
0.457 |
| rcrP | Streptococcus mutans UA159 |
47.368 |
90.476 |
0.429 |
| amiF | Streptococcus salivarius strain HSISS4 |
40.594 |
96.19 |
0.39 |
| amiF | Streptococcus thermophilus LMD-9 |
40.594 |
96.19 |
0.39 |
| amiF | Streptococcus thermophilus LMG 18311 |
40.594 |
96.19 |
0.39 |