Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | OSCIL6304_RS20010 | Genome accession | NC_019693 |
| Coordinates | 5157170..5157535 (+) | Length | 121 a.a. |
| NCBI ID | WP_015150212.1 | Uniprot ID | K9TMF1 |
| Organism | Oscillatoria acuminata PCC 6304 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 5152170..5162535
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OSCIL6304_RS20000 (Oscil6304_4056) | - | 5155016..5156293 (+) | 1278 | WP_015150211.1 | response regulator | - |
| OSCIL6304_RS20010 (Oscil6304_4058) | pilH | 5157170..5157535 (+) | 366 | WP_015150212.1 | response regulator | Machinery gene |
| OSCIL6304_RS20015 (Oscil6304_4059) | - | 5157549..5158097 (+) | 549 | WP_015150213.1 | chemotaxis protein CheW | - |
| OSCIL6304_RS31220 | - | 5158136..5158582 (-) | 447 | WP_052315773.1 | zinc ribbon domain-containing protein | - |
| OSCIL6304_RS20025 (Oscil6304_4061) | - | 5159301..5162528 (+) | 3228 | WP_015150214.1 | HAMP domain-containing methyl-accepting chemotaxis protein | - |
Sequence
Protein
Download Length: 121 a.a. Molecular weight: 13563.78 Da Isoelectric Point: 5.2384
>NTDB_id=54786 OSCIL6304_RS20010 WP_015150212.1 5157170..5157535(+) (pilH) [Oscillatoria acuminata PCC 6304]
MSTVLVVEDSVTQREMISTLLKESGLNVTVASDGLEALERIQETCPDLVVLDIVMPRMNGYEVCRRLKADPKTKNVPVVM
CSSKGEEFDRYWGMKQGADAYIAKPFQPTELVGTVKQLLRR
MSTVLVVEDSVTQREMISTLLKESGLNVTVASDGLEALERIQETCPDLVVLDIVMPRMNGYEVCRRLKADPKTKNVPVVM
CSSKGEEFDRYWGMKQGADAYIAKPFQPTELVGTVKQLLRR
Nucleotide
Download Length: 366 bp
>NTDB_id=54786 OSCIL6304_RS20010 WP_015150212.1 5157170..5157535(+) (pilH) [Oscillatoria acuminata PCC 6304]
ATGAGTACAGTTCTGGTTGTAGAAGATAGCGTCACGCAACGGGAGATGATCTCAACCCTACTGAAAGAGAGTGGGTTAAA
TGTTACCGTAGCGAGTGATGGCTTAGAAGCCTTGGAACGCATTCAGGAGACTTGCCCGGACCTAGTGGTACTCGATATCG
TGATGCCTCGCATGAATGGTTATGAAGTATGTCGCCGTCTCAAGGCTGATCCCAAAACCAAAAATGTTCCAGTGGTCATG
TGTTCGTCCAAAGGTGAAGAATTTGATCGCTATTGGGGCATGAAGCAAGGCGCGGATGCGTACATTGCTAAACCGTTCCA
ACCCACTGAATTGGTGGGAACTGTTAAACAGCTACTCAGAAGATAG
ATGAGTACAGTTCTGGTTGTAGAAGATAGCGTCACGCAACGGGAGATGATCTCAACCCTACTGAAAGAGAGTGGGTTAAA
TGTTACCGTAGCGAGTGATGGCTTAGAAGCCTTGGAACGCATTCAGGAGACTTGCCCGGACCTAGTGGTACTCGATATCG
TGATGCCTCGCATGAATGGTTATGAAGTATGTCGCCGTCTCAAGGCTGATCCCAAAACCAAAAATGTTCCAGTGGTCATG
TGTTCGTCCAAAGGTGAAGAATTTGATCGCTATTGGGGCATGAAGCAAGGCGCGGATGCGTACATTGCTAAACCGTTCCA
ACCCACTGAATTGGTGGGAACTGTTAAACAGCTACTCAGAAGATAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
78.333 |
99.174 |
0.777 |
| pilG | Acinetobacter baumannii strain A118 |
42.982 |
94.215 |
0.405 |
| micA | Streptococcus pneumoniae Cp1015 |
38.843 |
100 |
0.388 |
| vicR | Streptococcus mutans UA159 |
38.843 |
100 |
0.388 |
| pilL-C | Synechocystis sp. PCC 6803 |
38.136 |
97.521 |
0.372 |
| chpA | Acinetobacter baumannii strain A118 |
37.931 |
95.868 |
0.364 |