Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | OSCIL6304_RS06040 | Genome accession | NC_019693 |
| Coordinates | 1498097..1498459 (-) | Length | 120 a.a. |
| NCBI ID | WP_015147588.1 | Uniprot ID | - |
| Organism | Oscillatoria acuminata PCC 6304 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1493097..1503459
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OSCIL6304_RS06030 (Oscil6304_1223) | - | 1493667..1496363 (+) | 2697 | WP_015147586.1 | DNA methyltransferase | - |
| OSCIL6304_RS06035 (Oscil6304_1224) | - | 1496412..1497716 (+) | 1305 | WP_015147587.1 | DNA cytosine methyltransferase | - |
| OSCIL6304_RS06040 (Oscil6304_1225) | pilH | 1498097..1498459 (-) | 363 | WP_015147588.1 | response regulator | Machinery gene |
| OSCIL6304_RS33855 | - | 1499056..1499220 (+) | 165 | WP_156823748.1 | hypothetical protein | - |
| OSCIL6304_RS06045 (Oscil6304_1226) | pds | 1499582..1500964 (+) | 1383 | WP_015147589.1 | 15-cis-phytoene desaturase | - |
| OSCIL6304_RS06050 (Oscil6304_1227) | crtB | 1501066..1501992 (+) | 927 | WP_015147590.1 | 15-cis-phytoene synthase CrtB | - |
| OSCIL6304_RS33860 | - | 1501973..1502119 (-) | 147 | WP_156823749.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 120 a.a. Molecular weight: 13597.86 Da Isoelectric Point: 5.2164
>NTDB_id=54775 OSCIL6304_RS06040 WP_015147588.1 1498097..1498459(-) (pilH) [Oscillatoria acuminata PCC 6304]
MSIILIVDDSGTVREMVSDILKKSGLEVIEASDGVEAKEQIQAKPPDLVVTDIVMPRMNGYELCRWLKNDPKAQNIPVIM
CTSKSQEFDRYWGMKQGADAYITKPFRPAELIQTIKQLLR
MSIILIVDDSGTVREMVSDILKKSGLEVIEASDGVEAKEQIQAKPPDLVVTDIVMPRMNGYELCRWLKNDPKAQNIPVIM
CTSKSQEFDRYWGMKQGADAYITKPFRPAELIQTIKQLLR
Nucleotide
Download Length: 363 bp
>NTDB_id=54775 OSCIL6304_RS06040 WP_015147588.1 1498097..1498459(-) (pilH) [Oscillatoria acuminata PCC 6304]
ATGAGTATAATTCTAATTGTGGATGATAGCGGTACGGTACGAGAAATGGTATCGGACATTCTGAAAAAAAGCGGTTTGGA
AGTGATTGAAGCATCTGATGGAGTAGAAGCCAAAGAACAAATTCAGGCCAAGCCTCCTGATTTAGTCGTCACCGATATTG
TCATGCCCCGAATGAATGGCTATGAACTTTGTCGATGGTTAAAAAACGACCCGAAAGCCCAGAATATTCCCGTTATCATG
TGTACGAGCAAAAGTCAAGAGTTTGATCGGTATTGGGGGATGAAACAAGGAGCGGATGCTTACATCACGAAACCATTTCG
TCCGGCAGAACTGATTCAAACCATTAAACAACTCCTACGCTGA
ATGAGTATAATTCTAATTGTGGATGATAGCGGTACGGTACGAGAAATGGTATCGGACATTCTGAAAAAAAGCGGTTTGGA
AGTGATTGAAGCATCTGATGGAGTAGAAGCCAAAGAACAAATTCAGGCCAAGCCTCCTGATTTAGTCGTCACCGATATTG
TCATGCCCCGAATGAATGGCTATGAACTTTGTCGATGGTTAAAAAACGACCCGAAAGCCCAGAATATTCCCGTTATCATG
TGTACGAGCAAAAGTCAAGAGTTTGATCGGTATTGGGGGATGAAACAAGGAGCGGATGCTTACATCACGAAACCATTTCG
TCCGGCAGAACTGATTCAAACCATTAAACAACTCCTACGCTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
65.833 |
100 |
0.658 |
| pilG | Acinetobacter baumannii strain A118 |
44.737 |
95 |
0.425 |
| pilL-C | Synechocystis sp. PCC 6803 |
42.735 |
97.5 |
0.417 |
| chpA | Acinetobacter baumannii strain A118 |
41.88 |
97.5 |
0.408 |
| micA | Streptococcus pneumoniae Cp1015 |
38.333 |
100 |
0.383 |
| vicR | Streptococcus mutans UA159 |
37.5 |
100 |
0.375 |