Detailed information NTG0544795

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: J0J35_RS03470
• Genome accession: NZ_CP071301
• Coordinates: 702977..703846 (-)
• Length: 289 a.a.
• NCBI ID: WP_117517556.1
• Uniprot ID: -
• Organism: Lactococcus sp. LG606
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 697977..708846

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J0J35_RS03455 (J0J35_03460)	-	698953..699174 (+)	222	WP_019292266.1	hypothetical protein	-
J0J35_RS03460 (J0J35_03465)	trmFO	699248..700591 (-)	1344	WP_019293951.1	methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	-
J0J35_RS03465 (J0J35_03470)	topA	700637..702787 (-)	2151	WP_061413090.1	type I DNA topoisomerase	-
J0J35_RS03470 (J0J35_03475)	dprA	702977..703846 (-)	870	WP_117517556.1	DNA-processing protein DprA	Machinery gene
J0J35_RS03475 (J0J35_03480)	budA	703933..704631 (-)	699	WP_206917779.1	acetolactate decarboxylase	-
J0J35_RS03480 (J0J35_03485)	-	704776..706500 (-)	1725	WP_206917780.1	ABC transporter permease/substrate binding protein	-
J0J35_RS03485 (J0J35_03490)	-	706493..707695 (-)	1203	WP_014024780.1	glycine betaine/L-proline ABC transporter ATP-binding protein	-
J0J35_RS03490 (J0J35_03495)	-	707901..708521 (-)	621	WP_117517550.1	GntR family transcriptional regulator	-

Sequence

Protein

• Length: 289 a.a.
• Molecular weight: 32905.11 Da
• Isoelectric Point: 9.9003

>NTDB_id=544795 J0J35_RS03470 WP_117517556.1 702977..703846(-) (dprA) [Lactococcus sp. LG606]
MIKNFEILRLKKAGMSNLGILKLIDYQRRHEAKLTLRQLARIAEVKTVPNFIESYKSQDVKRLREQYKIFPSFSILDDIY
PEWLRETYNPPALFFYRGDLKLLSLPKLGFVGSREMSKEAPRIIHKLIEELKQNFVIVSGLARGVDTSSHVAAVKQKTPT
IAVIGNGLDISYPKENRKLQEYLAAHELVLSEYLVGEQPLKFHFPERNRIIAGLSRGVVVVEAKQRSGSLITSRYALEGN
REVFAVPGDILNRNASGCNQLIQQGAAKLVTHGQDILDEFYLYEGNFFP

Nucleotide

• Length: 870 bp

>NTDB_id=544795 J0J35_RS03470 WP_117517556.1 702977..703846(-) (dprA) [Lactococcus sp. LG606]
ATGATTAAAAACTTTGAAATATTACGTTTGAAAAAAGCAGGAATGTCTAATTTAGGGATTTTGAAACTGATTGATTATCA
GAGGAGGCATGAAGCAAAACTCACTCTACGCCAGTTAGCGCGGATTGCAGAGGTCAAAACTGTCCCTAATTTTATTGAGA
GTTATAAGAGTCAAGATGTGAAACGACTTCGTGAGCAATACAAAATTTTCCCCTCCTTTTCCATTTTAGATGACATTTAT
CCCGAATGGCTGAGAGAAACATATAATCCGCCTGCCCTCTTTTTTTACCGAGGAGATCTTAAATTGCTTAGTCTTCCTAA
ACTTGGGTTTGTAGGCAGTCGTGAAATGTCTAAGGAAGCACCAAGAATAATCCACAAGCTTATTGAGGAATTAAAGCAAA
ATTTTGTTATTGTGAGCGGATTAGCACGCGGTGTTGACACCTCAAGCCATGTAGCAGCTGTAAAACAAAAAACTCCAACC
ATTGCTGTCATTGGTAATGGGTTAGATATTAGTTATCCAAAAGAAAATCGTAAATTACAAGAATACTTAGCAGCACATGA
ATTAGTTTTATCAGAATACCTTGTAGGAGAGCAACCCCTCAAGTTTCATTTCCCAGAGAGAAATAGAATCATTGCTGGTC
TTTCCCGTGGTGTTGTCGTTGTGGAAGCAAAACAACGTAGTGGTAGCCTTATCACAAGTCGTTATGCTTTAGAGGGTAAT
AGAGAAGTTTTTGCTGTACCTGGAGATATTTTGAATAGAAATGCCTCTGGGTGTAATCAATTAATCCAACAAGGTGCAGC
AAAACTTGTCACTCATGGACAAGATATTTTAGATGAATTTTATTTATATGAAGGGAATTTCTTTCCTTAA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (75-271)

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (2-63)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Lactococcus lactis subsp. cremoris KW2	63.958	97.924	0.626
dprA	Streptococcus mutans UA159	55.197	96.54	0.533
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	53.405	96.54	0.516
dprA/cilB/dalA	Streptococcus pneumoniae D39	53.405	96.54	0.516
dprA/cilB/dalA	Streptococcus pneumoniae R6	53.405	96.54	0.516
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	53.405	96.54	0.516
dprA/cilB/dalA	Streptococcus mitis SK321	53.405	96.54	0.516
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	52.688	96.54	0.509
dprA	Latilactobacillus sakei subsp. sakei 23K	38.909	95.156	0.37