Detailed information NTG0544633

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: J0J34_RS05180
• Genome accession: NZ_CP071290
• Coordinates: 1064181..1065050 (+)
• Length: 289 a.a.
• NCBI ID: WP_023888985.1
• Uniprot ID: -
• Organism: Lactococcus garvieae strain LG791
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1059181..1070050

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J0J34_RS05160 (J0J34_05160)	-	1059510..1060130 (+)	621	WP_014024781.1	GntR family transcriptional regulator	-
J0J34_RS05165 (J0J34_05165)	-	1060335..1061537 (+)	1203	WP_014024780.1	quaternary amine ABC transporter ATP-binding protein	-
J0J34_RS05170 (J0J34_05170)	-	1061530..1063254 (+)	1725	WP_004257235.1	ABC transporter permease/substrate binding protein	-
J0J34_RS05175 (J0J34_05175)	budA	1063396..1064094 (+)	699	WP_004257238.1	acetolactate decarboxylase	-
J0J34_RS05180 (J0J34_05180)	dprA	1064181..1065050 (+)	870	WP_023888985.1	DNA-processing protein DprA	Machinery gene
J0J34_RS05185 (J0J34_05185)	topA	1065239..1067389 (+)	2151	WP_206886622.1	type I DNA topoisomerase	-
J0J34_RS05190 (J0J34_05190)	trmFO	1067434..1068777 (+)	1344	WP_014024777.1	methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	-
J0J34_RS05195 (J0J34_05195)	-	1068850..1069071 (-)	222	WP_014024776.1	hypothetical protein	-

Sequence

Protein

• Length: 289 a.a.
• Molecular weight: 32887.06 Da
• Isoelectric Point: 9.5626

>NTDB_id=544633 J0J34_RS05180 WP_023888985.1 1064181..1065050(+) (dprA) [Lactococcus garvieae strain LG791]
MIRNFEILRLKKAGMSNLGILKLIDYQERHEAKLTLRQLARIAEVKAVPNFIESYKSQDVKRLREQYKTFPSFSILDDIY
PEWLKEMYNPPTLLFYQGNLKLLNFPKLGFVGSREMSKEAPKITYKLIEELKQNFVIVSGLARGVDTSSHVAAIKQQTPT
IAVIGNGLDISYPKENRKLQEYLATHELVLSEYLVGEPPLKFHFPERNRIIAGLSRGIVVVEAKQRSGSLITSRYALEGN
REVFAVPGDILNRNASGCNQLIQQGAAKLITHGQDILDEFYLYEGNFLP

Nucleotide

• Length: 870 bp

>NTDB_id=544633 J0J34_RS05180 WP_023888985.1 1064181..1065050(+) (dprA) [Lactococcus garvieae strain LG791]
ATGATTAGAAATTTTGAAATATTGCGTTTGAAAAAAGCAGGAATGTCGAATCTAGGGATTTTGAAACTGATTGACTATCA
AGAGAGGCATGAAGCAAAACTTACTTTACGACAGTTAGCGAGGATCGCAGAAGTCAAAGCTGTCCCTAATTTTATTGAGA
GTTACAAGAGTCAGGATGTGAAACGACTTCGAGAGCAATATAAGACCTTCCCCTCCTTTTCCATCTTAGACGACATTTAT
CCTGAATGGCTGAAAGAAATGTATAATCCCCCGACTCTCCTTTTTTATCAAGGAAATCTTAAGTTGCTTAACTTCCCTAA
ACTCGGATTTGTCGGGAGCCGTGAAATGTCTAAGGAAGCACCTAAAATTACATACAAACTTATTGAGGAATTAAAACAAA
ACTTTGTTATAGTGAGCGGGTTAGCACGCGGTGTTGACACTTCTAGTCATGTAGCTGCTATAAAGCAACAAACACCAACC
ATTGCTGTCATTGGTAACGGTTTAGATATTAGTTATCCAAAAGAAAATCGTAAATTACAAGAGTATTTAGCCACTCATGA
ATTGGTTTTATCAGAATACCTTGTAGGAGAGCCTCCCCTTAAGTTTCATTTTCCAGAGAGAAATAGAATCATTGCGGGTC
TTTCTCGTGGAATTGTCGTTGTTGAAGCAAAGCAACGTAGCGGTAGCCTCATCACAAGTCGTTATGCCTTAGAGGGAAAT
AGAGAAGTATTTGCTGTACCTGGAGATATTTTGAACAGAAATGCCTCTGGCTGTAATCAATTAATCCAGCAAGGTGCAGC
CAAGCTTATCACTCATGGTCAAGATATTTTGGATGAATTTTATTTATATGAGGGTAATTTCCTTCCTTAA

Domains

Predicted by InterproScan.

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (2-63)

• DNA recombination-mediator protein A (DNA_processg_A) (74-271)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Lactococcus lactis subsp. cremoris KW2	63.604	97.924	0.623
dprA	Streptococcus mutans UA159	56.318	95.848	0.54
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	54.122	96.54	0.522
dprA/cilB/dalA	Streptococcus pneumoniae D39	54.122	96.54	0.522
dprA/cilB/dalA	Streptococcus pneumoniae R6	54.122	96.54	0.522
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	54.122	96.54	0.522
dprA/cilB/dalA	Streptococcus mitis SK321	54.122	96.54	0.522
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	53.405	96.54	0.516
dprA	Haemophilus influenzae Rd KW20	37.329	100	0.377