Detailed information NTG0054297

Bioinformatically predicted

Overview

• Name: vicR
• Type: Regulator
• Locus tag: SDSE_RS13410
• Genome accession: NC_019042
• Coordinates: 538537..539247 (+)
• Length: 236 a.a.
• NCBI ID: WP_003057225.1
• Uniprot ID: -
• Organism: Streptococcus dysgalactiae subsp. equisimilis AC-2713
• Function: repress comCDE expression; repress comX expression (predicted from homology) Competence regulation

Genomic Context

Location: 533537..544247

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SDSE_RS13385 (S_dysgal_equisimilis_AC2713_602)	-	534216..535211 (+)	996	WP_003057220.1	DUF3114 domain-containing protein	-
SDSE_RS13390 (S_dysgal_equisimilis_AC2713_603)	-	535307..535954 (-)	648	WP_003057245.1	amino acid ABC transporter permease	-
SDSE_RS13395 (S_dysgal_equisimilis_AC2713_604)	-	535969..536670 (-)	702	WP_015057398.1	amino acid ABC transporter permease	-
SDSE_RS13400 (S_dysgal_equisimilis_AC2713_605)	-	536684..537484 (-)	801	WP_015057399.1	transporter substrate-binding domain-containing protein	-
SDSE_RS13405 (S_dysgal_equisimilis_AC2713_606)	-	537484..538278 (-)	795	WP_015057400.1	amino acid ABC transporter ATP-binding protein	-
SDSE_RS13410 (S_dysgal_equisimilis_AC2713_607)	vicR	538537..539247 (+)	711	WP_003057225.1	response regulator YycF	Regulator
SDSE_RS13415 (S_dysgal_equisimilis_AC2713_608)	vicK	539240..540592 (+)	1353	WP_014612101.1	cell wall metabolism sensor histidine kinase VicK	Regulator
SDSE_RS13420 (S_dysgal_equisimilis_AC2713_609)	vicX	540596..541405 (+)	810	WP_003059746.1	MBL fold metallo-hydrolase	Regulator
SDSE_RS13425 (S_dysgal_equisimilis_AC2713_610)	-	541721..542584 (+)	864	WP_003059989.1	IS982 family transposase	-
SDSE_RS13430 (S_dysgal_equisimilis_AC2713_611)	rnc	543131..543823 (+)	693	WP_003057240.1	ribonuclease III	-

Sequence

Protein

• Length: 236 a.a.
• Molecular weight: 27071.98 Da
• Isoelectric Point: 5.0023

>NTDB_id=54297 SDSE_RS13410 WP_003057225.1 538537..539247(+) (vicR) [Streptococcus dysgalactiae subsp. equisimilis AC-2713]
MKKILIVDDEKPISDIIKFNLTKEGYDIVTAFDGREAVTIFEEEKPDLIILDLMLPELDGLEVAKEIRKTSHVPIIMLSA
KDSEFDKVIGLEIGADDYVTKPFSNRELLARVKAHLRRTETIETAVAEENASSGSQELTIGNLQILPDAFVAKKHGKEVE
LTHREFELLHHLANHMGQVMTREHLLETVWGYDYFGDVRTVDVTVRRLREKIEDTPSRPEYILTRRGIGYYMKSYD

Nucleotide

• Length: 711 bp

>NTDB_id=54297 SDSE_RS13410 WP_003057225.1 538537..539247(+) (vicR) [Streptococcus dysgalactiae subsp. equisimilis AC-2713]
ATGAAAAAAATACTGATTGTGGATGATGAAAAACCGATTTCTGACATTATTAAGTTTAATTTGACAAAAGAAGGTTATGA
CATTGTTACAGCTTTTGATGGACGCGAAGCGGTAACAATTTTTGAAGAAGAAAAGCCAGATTTAATTATTCTTGATTTGA
TGCTCCCTGAGTTGGACGGTCTTGAAGTAGCCAAGGAAATTCGTAAAACCAGTCATGTCCCGATTATTATGCTGTCGGCT
AAGGATAGTGAGTTTGACAAGGTCATTGGTCTTGAAATTGGGGCAGATGATTATGTTACCAAACCTTTTTCAAATCGTGA
ACTATTAGCGCGTGTCAAGGCTCATTTACGTCGAACAGAAACGATCGAAACAGCCGTAGCAGAGGAAAATGCTTCTTCAG
GTTCACAAGAGTTAACCATTGGTAATTTACAAATTTTACCAGATGCTTTTGTGGCTAAAAAACATGGCAAAGAAGTGGAA
TTAACCCATCGTGAATTTGAATTATTACACCACCTGGCCAATCATATGGGTCAAGTGATGACACGAGAGCACTTGCTTGA
GACGGTTTGGGGCTATGATTACTTTGGCGATGTCCGTACTGTTGACGTGACGGTTCGTCGTCTGCGTGAAAAAATTGAAG
ACACACCAAGCCGTCCCGAATATATTTTAACGAGACGCGGTATTGGGTACTACATGAAATCTTATGACTAG

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (4-113)

• Transcriptional regulatory protein, C terminal (Trans_reg_C) (156-231)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
vicR	Streptococcus mutans UA159	90.254	100	0.903
micA	Streptococcus pneumoniae Cp1015	79.06	99.153	0.784
covR	Lactococcus lactis subsp. lactis strain DGCC12653	44.828	98.305	0.441
covR	Streptococcus salivarius strain HSISS4	44.828	98.305	0.441
scnR	Streptococcus mutans UA159	37.712	100	0.377