Detailed information
Bioinformatically predicted
Overview
| Name | comGG | Type | Machinery gene |
| Locus tag | JWR96_RS00180 | Genome accession | NZ_CP070856 |
| Coordinates | 41902..42201 (+) | Length | 99 a.a. |
| NCBI ID | WP_021037947.1 | Uniprot ID | A0AAX4AJK4 |
| Organism | Lactococcus cremoris strain GR0507 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 36902..47201
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JWR96_RS00150 (JWR96_00150) | comGA | 38511..39491 (+) | 981 | WP_043736167.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| JWR96_RS00155 (JWR96_00155) | comGB | 39391..40416 (+) | 1026 | WP_052206589.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| JWR96_RS00160 (JWR96_00160) | comGC | 40460..40759 (+) | 300 | WP_052206590.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| JWR96_RS00165 (JWR96_00165) | comGD | 40770..41201 (+) | 432 | WP_050750513.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| JWR96_RS00170 (JWR96_00170) | comGE | 41173..41469 (+) | 297 | WP_043736169.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| JWR96_RS00175 (JWR96_00175) | comGF | 41432..41878 (+) | 447 | WP_043736171.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| JWR96_RS00180 (JWR96_00180) | comGG | 41902..42201 (+) | 300 | WP_021037947.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| JWR96_RS00185 (JWR96_00185) | - | 42282..42719 (+) | 438 | WP_011677180.1 | zinc-dependent MarR family transcriptional regulator | - |
| JWR96_RS00190 (JWR96_00190) | - | 42716..43558 (+) | 843 | WP_011677179.1 | zinc ABC transporter substrate-binding protein | - |
| JWR96_RS00195 (JWR96_00195) | - | 43760..45132 (+) | 1373 | WP_185753013.1 | IS3 family transposase | - |
| JWR96_RS00200 (JWR96_00200) | - | 45224..45961 (+) | 738 | WP_011836039.1 | metal ABC transporter ATP-binding protein | - |
| JWR96_RS00205 (JWR96_00205) | - | 45954..46763 (+) | 810 | WP_011677177.1 | metal ABC transporter permease | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11269.27 Da Isoelectric Point: 9.8236
>NTDB_id=541049 JWR96_RS00180 WP_021037947.1 41902..42201(+) (comGG) [Lactococcus cremoris strain GR0507]
MVLLLIFSLFLQFYLQKQVLTAQQLKIEKERLTAELMVSLALKKDLKTSGQLNFDCGNLTYKLLTDLSADSTSGGQTVSN
KTYCFDVRLKDGRIFQIKK
MVLLLIFSLFLQFYLQKQVLTAQQLKIEKERLTAELMVSLALKKDLKTSGQLNFDCGNLTYKLLTDLSADSTSGGQTVSN
KTYCFDVRLKDGRIFQIKK
Nucleotide
Download Length: 300 bp
>NTDB_id=541049 JWR96_RS00180 WP_021037947.1 41902..42201(+) (comGG) [Lactococcus cremoris strain GR0507]
TTGGTTTTACTGCTAATTTTTTCTTTATTTCTACAGTTTTATTTGCAAAAACAGGTGCTTACAGCTCAGCAATTGAAAAT
AGAAAAGGAGCGACTGACAGCCGAATTAATGGTTTCATTGGCTCTTAAAAAGGATTTGAAAACGAGTGGTCAACTTAATT
TTGATTGTGGAAATTTAACTTATAAATTACTGACAGATCTGTCAGCTGATTCAACTAGCGGTGGTCAAACTGTTAGTAAT
AAAACTTATTGTTTTGATGTTCGGCTTAAGGATGGAAGAATTTTTCAAATAAAAAAATAA
TTGGTTTTACTGCTAATTTTTTCTTTATTTCTACAGTTTTATTTGCAAAAACAGGTGCTTACAGCTCAGCAATTGAAAAT
AGAAAAGGAGCGACTGACAGCCGAATTAATGGTTTCATTGGCTCTTAAAAAGGATTTGAAAACGAGTGGTCAACTTAATT
TTGATTGTGGAAATTTAACTTATAAATTACTGACAGATCTGTCAGCTGATTCAACTAGCGGTGGTCAAACTGTTAGTAAT
AAAACTTATTGTTTTGATGTTCGGCTTAAGGATGGAAGAATTTTTCAAATAAAAAAATAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGG | Lactococcus lactis subsp. cremoris KW2 |
100 |
100 |
1 |