Detailed information NTG0540394

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: LGV82_RS17840
• Genome accession: NZ_CP086104
• Coordinates: 3760603..3761808 (+)
• Length: 401 a.a.
• NCBI ID: WP_016722608.1
• Uniprot ID: A0ABX7ZX23
• Organism: Ralstonia pseudosolanacearum strain RS650
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 3755603..3766808

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LGV82_RS17825 (LGV82_17820)	-	3756629..3758602 (-)	1974	WP_247393690.1	glycosyltransferase family 39 protein	-
LGV82_RS17830 (LGV82_17825)	def	3758650..3759159 (-)	510	WP_011000037.1	peptide deformylase	-
LGV82_RS17835 (LGV82_17830)	-	3759413..3760585 (+)	1173	WP_011000036.1	LysM peptidoglycan-binding domain-containing protein	-
LGV82_RS17840 (LGV82_17835)	dprA	3760603..3761808 (+)	1206	WP_016722608.1	DNA-processing protein DprA	Machinery gene
LGV82_RS17845 (LGV82_17840)	-	3761849..3762238 (+)	390	WP_011000034.1	thioredoxin family protein	-
LGV82_RS17850 (LGV82_17845)	-	3762469..3765102 (+)	2634	WP_211906410.1	DNA topoisomerase III	-
LGV82_RS17855 (LGV82_17850)	-	3765202..3766140 (-)	939	WP_011000032.1	LysR family transcriptional regulator	-

Sequence

Protein

• Length: 401 a.a.
• Molecular weight: 41299.33 Da
• Isoelectric Point: 6.0524

>NTDB_id=540394 LGV82_RS17840 WP_016722608.1 3760603..3761808(+) (dprA) [Ralstonia pseudosolanacearum strain RS650]
MIDASQVAAPAATAPADPLDATRDPAELAAWLRLTETPGIGPVAARQLLAAFGLPQDIFRQSYAALAKVLPERQARALLA
EPDEALAALIERTAAWAAEPGNAIFTLADRGYPPRLLELPDPPTLLYAKGDVSLLRAAAVGVVGARSATAQGLENARAFA
QALSAANVTIVSGLALGIDAAAHDGALTGPGSTIAVVGTGLDMVYPARNRALAHRIAEAGLILSEYPLGMGARAENFPRR
NRLIAGLARGLLVVEAAAQSGSLITARLAAEQGRDVFAIPGSIHSPLAKGCHLLIKQGAKLVETAADILDELGWSRTPTP
ATRTPRTAAQAPVPASAPAARPAATAAETALLDALGFDPVDLDTLCERTGQTAANLSAQLLALELAGHIERQPGGRFLRL
P

Nucleotide

• Length: 1206 bp

>NTDB_id=540394 LGV82_RS17840 WP_016722608.1 3760603..3761808(+) (dprA) [Ralstonia pseudosolanacearum strain RS650]
TTGATCGATGCCTCACAGGTCGCGGCGCCCGCCGCGACCGCTCCCGCCGATCCCCTCGACGCCACACGCGATCCCGCCGA
GCTGGCCGCTTGGCTGCGGCTGACGGAAACGCCGGGCATCGGCCCCGTCGCCGCGCGGCAACTGCTGGCCGCTTTCGGGC
TACCCCAGGACATCTTCCGTCAATCCTATGCGGCACTCGCCAAGGTGCTGCCTGAACGGCAAGCGCGCGCGCTGCTGGCC
GAGCCGGACGAAGCGCTCGCCGCGCTGATCGAGCGGACTGCCGCCTGGGCCGCCGAACCGGGCAATGCCATCTTCACGCT
GGCCGACCGTGGCTACCCGCCCCGGCTGCTGGAACTCCCCGATCCGCCGACGCTGCTGTATGCCAAGGGCGATGTCTCGC
TGCTGCGGGCTGCGGCGGTGGGCGTGGTCGGCGCGCGCAGCGCCACCGCGCAGGGCCTGGAGAACGCCCGCGCCTTCGCG
CAGGCGCTGTCCGCCGCCAACGTGACGATCGTCTCGGGGCTGGCGCTGGGCATCGATGCCGCCGCACACGACGGCGCGCT
GACCGGGCCCGGCAGCACCATCGCGGTGGTCGGCACGGGGCTGGACATGGTCTACCCGGCCCGGAACCGAGCCCTGGCAC
ACCGCATCGCCGAAGCCGGGCTGATCCTGTCGGAGTACCCGCTCGGCATGGGGGCACGGGCCGAGAACTTCCCGCGCCGC
AACCGGCTGATCGCCGGGCTCGCGCGCGGACTGCTGGTGGTGGAGGCCGCCGCGCAATCCGGTTCGCTGATCACCGCCCG
GCTGGCCGCCGAGCAGGGGCGCGATGTGTTCGCCATTCCCGGCTCGATCCATTCGCCGCTGGCCAAGGGCTGCCACCTGC
TGATCAAGCAGGGTGCCAAGCTGGTCGAGACGGCGGCCGACATCCTGGACGAACTGGGCTGGAGCCGCACACCGACGCCA
GCGACACGGACACCGCGCACGGCCGCCCAGGCACCTGTCCCCGCATCCGCCCCGGCCGCACGTCCGGCGGCAACGGCCGC
GGAAACCGCGTTGCTCGATGCGCTCGGCTTCGACCCGGTCGACCTCGACACCCTGTGCGAACGCACCGGCCAAACCGCGG
CCAACCTGTCGGCACAACTGCTGGCGCTGGAGCTGGCAGGCCACATCGAGCGCCAACCGGGCGGACGCTTTCTGCGGCTG
CCATAG

Domains

Predicted by InterProScan.

• DNA recombination-mediator protein A (DNA_processg_A) (101-303)

• DprA winged helix domain (WHD_DprA) (336-395)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Neisseria gonorrhoeae MS11	42.674	97.007	0.414
dprA	Neisseria gonorrhoeae strain FA1090	42.416	97.007	0.411
dprA	Neisseria meningitidis MC58	41.519	98.504	0.409
dprA	Neisseria meningitidis strain C311	41.519	98.504	0.409
dprA	Vibrio campbellii strain DS40M4	42.448	95.761	0.406
dprA	Vibrio cholerae O1 biovar El Tor strain E7946	38.442	96.01	0.369
dprA	Vibrio cholerae strain A1552	38.442	96.01	0.369
dprA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	37.859	95.511	0.362