Detailed information NTG0535791

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: I6J46_RS08865
• Genome accession: NZ_CP069586
• Coordinates: 1858086..1859204 (-)
• Length: 372 a.a.
• NCBI ID: WP_204085940.1
• Uniprot ID: -
• Organism: Acinetobacter pittii strain FDAARGOS_1216
• Function: mediate the depolymerization of the type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1853086..1864204

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6J46_RS08835 (I6J46_08835)	-	1853914..1854762 (+)	849	WP_204086013.1	class II glutamine amidotransferase	-
I6J46_RS08840 (I6J46_08840)	-	1855014..1855469 (+)	456	WP_002121698.1	bacteriohemerythrin	-
I6J46_RS08845 (I6J46_08845)	-	1855623..1856690 (+)	1068	WP_204085938.1	hypothetical protein	-
I6J46_RS08850 (I6J46_08850)	-	1856690..1857004 (+)	315	WP_204085939.1	RnfH family protein	-
I6J46_RS08855 (I6J46_08855)	omlA	1857069..1857467 (-)	399	WP_002121740.1	outer membrane protein assembly factor BamE	-
I6J46_RS08860 (I6J46_08860)	fur	1857579..1858016 (+)	438	WP_002121758.1	ferric iron uptake transcriptional regulator	-
I6J46_RS08865 (I6J46_08865)	pilU	1858086..1859204 (-)	1119	WP_204085940.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
I6J46_RS08870 (I6J46_08870)	pilT	1859224..1860261 (-)	1038	WP_002121749.1	type IV pilus twitching motility protein PilT	Machinery gene
I6J46_RS08875 (I6J46_08875)	yggS	1860388..1861080 (+)	693	WP_204085941.1	YggS family pyridoxal phosphate-dependent enzyme	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 41927.14 Da
• Isoelectric Point: 6.6404

>NTDB_id=535791 I6J46_RS08865 WP_204085940.1 1858086..1859204(-) (pilU) [Acinetobacter pittii strain FDAARGOS_1216]
MDFNDLLNLMVEKKSSDLFITDGVAPSMKINGQIVPISKNSLSGEIIGQLLHSIMSEKQRKEFAETRECNFAIMNRDKTA
RFRVSAFQQRDMPGMVLRRIETKIPSIDDLQLPPVLKDLSMTKRGIIIFVGATGTGKSTSLASMISYRNHNSKGHIITIE
DPIEFIHEHAGCIITQREVGIDTDSFEIALKNTLRQAPDVILIGEIRTREVMDYAIGFAETGHLVLATMHANNANQALDR
IIHFFESDRHSQLYMDLSLNLKALIAQQLIPTPDGNSRRAAIEILINSPLISDYIRKGEIHEIKDLMKRSRELGMQTFDQ
ALFDLYKSGQITYKDALKHADSPNDLRLTIKLAEEGPEQIAGTNQHLTFDRQ

Nucleotide

• Length: 1119 bp

>NTDB_id=535791 I6J46_RS08865 WP_204085940.1 1858086..1859204(-) (pilU) [Acinetobacter pittii strain FDAARGOS_1216]
ATGGATTTTAATGACCTACTCAACCTGATGGTTGAAAAAAAATCATCCGACCTCTTTATTACAGATGGCGTTGCACCATC
GATGAAGATTAACGGGCAAATTGTTCCCATTTCAAAAAACAGTCTTTCAGGCGAAATTATTGGGCAACTATTACATTCCA
TCATGAGTGAAAAACAACGCAAAGAATTTGCTGAGACTCGTGAATGTAACTTTGCCATTATGAACCGTGATAAAACTGCC
CGCTTTCGTGTGAGTGCTTTTCAGCAACGCGACATGCCAGGCATGGTGCTACGTCGAATTGAAACCAAAATTCCTTCAAT
TGACGACTTACAATTACCGCCAGTGCTTAAAGATTTATCGATGACCAAACGTGGCATCATTATTTTTGTAGGGGCAACAG
GTACAGGTAAATCGACATCATTGGCTTCAATGATTAGCTATCGTAACCATAACTCTAAAGGTCACATCATTACCATTGAA
GACCCTATCGAGTTTATTCATGAACATGCTGGCTGCATCATTACCCAACGTGAAGTCGGGATCGATACAGACTCATTTGA
AATTGCTTTAAAGAATACTTTGCGACAAGCACCCGATGTAATCTTGATTGGTGAGATCCGTACGCGTGAAGTCATGGACT
ATGCGATTGGTTTTGCCGAAACGGGTCACTTGGTCTTAGCCACGATGCATGCGAACAACGCCAACCAAGCACTTGACCGT
ATTATTCACTTCTTTGAAAGTGACCGTCATAGCCAGCTCTACATGGATTTATCGCTTAATTTAAAGGCCTTGATTGCACA
ACAACTTATTCCGACTCCAGATGGTAATTCGCGCCGTGCAGCGATTGAGATTCTCATTAACTCACCACTAATTTCAGACT
ATATTCGCAAAGGCGAAATTCATGAAATTAAAGATTTAATGAAACGCTCACGTGAACTCGGTATGCAAACTTTTGACCAA
GCACTGTTTGATCTTTATAAGTCAGGCCAAATTACCTACAAAGATGCATTAAAACATGCCGACTCACCAAACGATTTACG
TTTAACAATTAAGCTTGCCGAAGAAGGTCCTGAGCAAATTGCAGGCACAAATCAGCATTTAACCTTCGACCGACAGTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (33-250)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Acinetobacter baylyi ADP1	75.397	100	0.766
pilU	Pseudomonas stutzeri DSM 10701	69.003	99.731	0.688
pilU	Vibrio cholerae strain A1552	53.514	99.462	0.532
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	40.934	97.849	0.401
pilT	Legionella pneumophila strain Lp02	39.941	90.86	0.363
pilT	Legionella pneumophila strain ERS1305867	39.941	90.86	0.363