Detailed information NTG0535550

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: LG939_RS02745
• Genome accession: NZ_CP084738
• Coordinates: 574204..575409 (-)
• Length: 401 a.a.
• NCBI ID: WP_011000035.1
• Uniprot ID: Q8Y3B2
• Organism: Ralstonia pseudosolanacearum strain RS639
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 569204..580409

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LG939_RS02730 (LG939_02745)	-	569870..570808 (+)	939	WP_011000032.1	LysR family transcriptional regulator	-
LG939_RS02735 (LG939_02750)	-	570910..573543 (-)	2634	WP_016722609.1	DNA topoisomerase III	-
LG939_RS02740 (LG939_02755)	-	573774..574163 (-)	390	WP_020830850.1	thioredoxin family protein	-
LG939_RS02745 (LG939_02760)	dprA	574204..575409 (-)	1206	WP_011000035.1	DNA-processing protein DprA	Machinery gene
LG939_RS02750 (LG939_02765)	-	575427..576599 (-)	1173	WP_011000036.1	LysM peptidoglycan-binding domain-containing protein	-
LG939_RS02755 (LG939_02770)	def	576853..577362 (+)	510	WP_011000037.1	peptide deformylase	-
LG939_RS02760 (LG939_02775)	-	577410..579383 (+)	1974	WP_043885530.1	glycosyltransferase family 39 protein	-

Sequence

Protein

• Length: 401 a.a.
• Molecular weight: 41280.28 Da
• Isoelectric Point: 5.9781

>NTDB_id=535550 LG939_RS02745 WP_011000035.1 574204..575409(-) (dprA) [Ralstonia pseudosolanacearum strain RS639]
MIDASQVAAPAATAPADPLDATRDPAELAAWLRLTETPGIGPVAARQLLAAFGLPQDIFRQSYAALAKVLPERQARALLA
EPDEALAALIERTAAWAAEPGNAIFTLADRGYPPRLLELPDPPTLLYAKGDVSLLRAAAVGVVGARSATAQGLENARAFA
QALSAANVTIVSGLALGIDAAAHDGALTGPGSTIAVVGTGLDMVYPARNRALAHHIAEAGLILSEYPLGMGARAENFPRR
NRLIAGLARGLLVVEAAAQSGSLITARLAAEQGRDVFAIPGSIHSPLAKGCHLLIKQGAKLVETAADILDELGWSRTPTP
ATRTPRTAAQAPVPASAPAARPAATAAETALLDALGFDPVDLDTLCERTGQTAANLSAQLLALELAGHIERQPGGRFLRL
P

Nucleotide

• Length: 1206 bp

>NTDB_id=535550 LG939_RS02745 WP_011000035.1 574204..575409(-) (dprA) [Ralstonia pseudosolanacearum strain RS639]
TTGATCGATGCCTCACAGGTCGCGGCGCCCGCCGCGACCGCTCCCGCCGATCCCCTCGACGCCACACGCGATCCCGCCGA
GCTGGCCGCTTGGCTGCGGCTGACGGAAACGCCGGGCATCGGCCCCGTCGCCGCGCGGCAACTGCTGGCCGCTTTCGGGC
TACCCCAGGACATCTTCCGTCAATCCTATGCGGCACTCGCCAAGGTGCTGCCTGAACGACAAGCGCGCGCGCTGCTGGCC
GAGCCGGACGAAGCGCTCGCCGCGCTGATCGAGCGGACTGCCGCCTGGGCCGCCGAACCGGGCAATGCCATCTTCACGCT
GGCCGACCGTGGCTACCCGCCCCGGCTGCTGGAACTCCCCGATCCGCCGACGCTGCTGTATGCCAAGGGCGATGTCTCGC
TGCTGCGGGCTGCGGCGGTGGGCGTGGTCGGCGCGCGCAGCGCCACCGCGCAGGGTCTGGAGAACGCCCGCGCCTTCGCG
CAGGCGCTGTCCGCCGCCAACGTGACGATCGTCTCGGGGCTGGCGCTGGGCATCGATGCCGCCGCACACGACGGCGCGCT
GACCGGGCCCGGCAGCACCATCGCGGTGGTCGGCACGGGGCTGGACATGGTCTACCCGGCCCGGAACCGAGCCCTGGCAC
ACCACATCGCCGAAGCCGGGCTGATCCTGTCGGAGTACCCGCTCGGCATGGGGGCACGGGCCGAGAACTTCCCGCGCCGC
AACAGGCTGATCGCCGGGCTCGCGCGCGGACTGCTGGTGGTGGAGGCCGCCGCGCAATCCGGTTCGCTGATCACCGCCCG
GCTGGCCGCCGAGCAGGGGCGCGATGTGTTCGCCATTCCCGGCTCGATCCATTCGCCGCTGGCCAAGGGCTGCCACCTGC
TGATCAAGCAGGGTGCCAAGCTGGTCGAGACGGCGGCCGACATCCTGGACGAACTGGGCTGGAGCCGCACACCGACGCCA
GCGACACGGACACCGCGCACGGCCGCCCAGGCACCTGTCCCCGCATCCGCCCCGGCCGCACGTCCGGCGGCAACGGCCGC
GGAAACCGCGTTGCTCGATGCGCTCGGCTTCGACCCGGTCGACCTCGACACCCTGTGCGAACGCACCGGCCAAACCGCGG
CCAACCTGTCGGCACAACTGCTGGCGCTGGAGCTGGCAGGCCACATCGAGCGCCAACCGGGCGGACGCTTTCTGCGGCTG
CCATAG

Domains

Predicted by InterProScan.

• DprA winged helix domain (WHD_DprA) (336-395)

• DNA recombination-mediator protein A (DNA_processg_A) (101-303)

3D structure

• AlphaFold DB: Q8Y3B2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Neisseria gonorrhoeae MS11	42.674	97.007	0.414
dprA	Neisseria gonorrhoeae strain FA1090	42.416	97.007	0.411
dprA	Neisseria meningitidis strain C311	41.519	98.504	0.409
dprA	Neisseria meningitidis MC58	41.519	98.504	0.409
dprA	Vibrio campbellii strain DS40M4	42.188	95.761	0.404
dprA	Vibrio cholerae strain A1552	38.182	96.01	0.367
dprA	Vibrio cholerae O1 biovar El Tor strain E7946	38.182	96.01	0.367