Detailed information NTG0529190

Bioinformatically predicted

Overview

• Name: comEC
• Type: Machinery gene
• Locus tag: LLF72_RS08640
• Genome accession: NZ_CP068511
• Coordinates: 1720737..1722008 (-)
• Length: 423 a.a.
• NCBI ID: WP_324187032.1
• Uniprot ID: -
• Organism: Lactococcus cremoris strain F.2.7
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1715737..1727008

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LLF72_RS08605 (LLF72_08435)	atpF	1716200..1716706 (-)	507	WP_010906128.1	F0F1 ATP synthase subunit B	-
LLF72_RS08610 (LLF72_08440)	atpB	1716721..1717434 (-)	714	WP_015082746.1	F0F1 ATP synthase subunit A	-
LLF72_RS08615 (LLF72_08445)	-	1717481..1717696 (-)	216	WP_014572212.1	F0F1 ATP synthase subunit C	-
LLF72_RS08620 (LLF72_08450)	-	1717879..1718655 (-)	777	WP_014572211.1	alpha/beta hydrolase family protein	-
LLF72_RS08625 (LLF72_08455)	-	1718939..1719243 (-)	305	Protein_1677	ComEC/Rec2 family competence protein	-
LLF72_RS08630 (LLF72_08460)	-	1719264..1720154 (-)	891	WP_081213191.1	IS982-like element IS982B family transposase	-
LLF72_RS08635 (LLF72_13170)	comEC	1720231..1720740 (-)	510	WP_228764033.1	MBL fold metallo-hydrolase	Machinery gene
LLF72_RS08640 (LLF72_08465)	comEC	1720737..1722008 (-)	1272	WP_324187032.1	ComEC/Rec2 family competence protein	Machinery gene
LLF72_RS08645	comEA	1722136..1722237 (-)	102	WP_228764031.1	helix-hairpin-helix domain-containing protein	Machinery gene
LLF72_RS08650 (LLF72_08470)	comEA	1722234..1722716 (-)	483	WP_237025447.1	SLBB domain-containing protein	Machinery gene
LLF72_RS08655 (LLF72_08475)	-	1722847..1724208 (-)	1362	WP_014572203.1	ABC transporter permease	-
LLF72_RS08660 (LLF72_08480)	-	1724205..1725137 (-)	933	WP_014572202.1	ABC transporter ATP-binding protein	-
LLF72_RS08665 (LLF72_08485)	-	1725243..1725641 (-)	399	WP_011676775.1	hypothetical protein	-
LLF72_RS08670 (LLF72_08490)	-	1725758..1726317 (-)	560	Protein_1686	GNAT family N-acetyltransferase	-

Sequence

Protein

• Length: 423 a.a.
• Molecular weight: 49044.21 Da
• Isoelectric Point: 9.7194

>NTDB_id=529190 LLF72_RS08640 WP_324187032.1 1720737..1722008(-) (comEC) [Lactococcus cremoris strain F.2.7]
MIPILIVFAVFFLLINSLSIRDNENQPKNLSKIELIPDTIQVNGDLLSFQGRMNGQKYQVYDTLKSLKEKGFYQNLSQNC
QLSFTGNLEIPETQRNFNGFDDQKYLTSQNIYRQITIQQITNVEIKKNFDLHTLRRKAIVWTQNHFPKPMSDYMTGLLFG
FLSKDFNQMSDIYSSLGIIHLFALSGMQVNFFIDWFRKILLRMGLTRERVNLVQIPFSIFYAFMTGLSVSVLRALFQKNI
RLTSLDNIAVTTLVLMLISPKFLLTTGGQLTLFYAFVISMLNHPFSNLNGLKKVLTESSVLSLCVLPLLIFDFHIFQPLS
ILLTIIFGFLFDFMLLPLLLCCFLISFLGFLLNLNYIFQILEWLVYKVDLPLHYPFVLGKPSSLELIILFVLIGLFVDSF
SHKKRRFFLIGFIFLFFSSLKIQ

Nucleotide

• Length: 1272 bp

>NTDB_id=529190 LLF72_RS08640 WP_324187032.1 1720737..1722008(-) (comEC) [Lactococcus cremoris strain F.2.7]
ATGATTCCGATATTAATTGTTTTTGCTGTATTTTTTCTGTTAATCAATAGTCTTAGTATTAGGGATAATGAAAATCAACC
AAAAAATCTCTCAAAAATTGAATTAATTCCAGATACAATCCAAGTCAATGGTGATTTATTGAGTTTTCAGGGGAGAATGA
ATGGACAAAAATATCAAGTCTATGACACATTGAAAAGTCTAAAAGAGAAAGGGTTTTATCAGAACTTAAGTCAAAATTGT
CAGTTAAGTTTCACAGGAAACCTTGAAATACCAGAAACTCAGCGAAATTTTAATGGTTTTGATGACCAAAAATATTTAAC
TAGTCAAAATATCTATCGACAGATTACCATCCAACAAATTACAAATGTGGAAATAAAAAAGAATTTTGACCTTCATACTT
TAAGGCGAAAGGCAATTGTTTGGACACAAAATCATTTTCCAAAACCGATGAGTGACTATATGACAGGTTTGCTTTTTGGC
TTTTTAAGTAAGGATTTTAATCAGATGAGCGATATTTATAGCTCTTTAGGAATTATTCATCTTTTTGCTCTATCAGGAAT
GCAAGTAAATTTTTTTATTGATTGGTTTCGTAAAATACTTCTTCGCATGGGACTGACGAGAGAAAGAGTGAATCTTGTTC
AAATTCCATTTTCTATTTTTTATGCTTTTATGACGGGATTATCGGTTTCAGTTTTAAGAGCCCTTTTTCAAAAAAATATT
CGTCTGACTTCTTTGGATAATATCGCAGTTACGACATTAGTTTTGATGCTCATAAGTCCAAAATTTTTACTGACGACTGG
TGGTCAGCTTACCTTGTTTTATGCTTTTGTCATTTCGATGCTTAATCATCCTTTTTCTAATTTAAATGGATTGAAAAAAG
TGCTGACAGAATCATCAGTCCTTTCACTTTGTGTTCTTCCGTTACTCATCTTTGATTTCCATATTTTTCAGCCTCTTTCA
ATATTATTAACAATTATATTTGGTTTTCTTTTTGATTTTATGTTGCTCCCGCTGCTTTTATGCTGTTTTCTTATATCATT
TTTGGGATTTTTGCTCAATTTAAATTATATTTTTCAAATTCTAGAATGGCTAGTTTATAAAGTTGATTTACCCTTACATT
ACCCCTTTGTTTTGGGGAAACCTAGTTCACTCGAATTAATTATTCTATTTGTGTTAATTGGTTTATTCGTAGATTCATTT
TCTCATAAAAAAAGGAGATTTTTTTTAATTGGATTTATATTTTTATTTTTTTCATCACTAAAAATCCAATGA

Domains

Predicted by InterProScan.

• Competence protein (Competence) (157-397)

• Domain of unknown function (DUF4131) (DUF4131) (56-122)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC	Lactococcus lactis subsp. cremoris KW2	96.882	98.582	0.955
comEC/celB	Streptococcus mitis SK321	46.512	91.489	0.426
comEC/celB	Streptococcus mitis NCTC 12261	45.995	91.489	0.421
comEC/celB	Streptococcus pneumoniae TIGR4	45.995	91.489	0.421
comEC/celB	Streptococcus pneumoniae Rx1	45.22	91.489	0.414
comEC/celB	Streptococcus pneumoniae D39	45.22	91.489	0.414
comEC/celB	Streptococcus pneumoniae R6	45.22	91.489	0.414