Detailed information NTG0527956

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: I6I50_RS14015
• Genome accession: NZ_CP068195
• Coordinates: 2872235..2873428 (+)
• Length: 397 a.a.
• NCBI ID: WP_087013044.1
• Uniprot ID: -
• Organism: Acinetobacter johnsonii strain FDAARGOS_1093
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2867235..2878428

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6I50_RS14005 (I6I50_14005)	-	2868343..2870442 (+)	2100	WP_151836376.1	EAL domain-containing protein	-
I6I50_RS14010 (I6I50_14010)	-	2870936..2871997 (+)	1062	WP_151836375.1	3-deoxy-7-phosphoheptulonate synthase	-
I6I50_RS14015 (I6I50_14015)	pilU	2872235..2873428 (+)	1194	WP_087013044.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
I6I50_RS14020 (I6I50_14020)	-	2873475..2874653 (-)	1179	WP_195728986.1	MFS transporter	-
I6I50_RS14025 (I6I50_14025)	gcvH	2874914..2875288 (-)	375	WP_004693240.1	glycine cleavage system protein GcvH	-
I6I50_RS14030 (I6I50_14030)	-	2875360..2876388 (-)	1029	WP_004979806.1	AraC family transcriptional regulator	-

Sequence

Protein

• Length: 397 a.a.
• Molecular weight: 44706.06 Da
• Isoelectric Point: 6.3921

>NTDB_id=527956 I6I50_RS14015 WP_087013044.1 2872235..2873428(+) (pilU) [Acinetobacter johnsonii strain FDAARGOS_1093]
MYSAELLEEARRMMFHMLSKVVEYGGSDLFISADFPPSIKHQGLMKPLGQQNLPSDQTKLFAYSLMNEKQRLEFETELEC
NFAISVPNVSRFRVNVFQQQLHVGMVIRTITAEIPNFTKLQLPTSLKDVIMEKRGLVLVVGGTGSGKSTSLAAMIDHRNE
NSAGHIITVEDPVEYVHKHKKSMITHREVGVDCHSWHNALKNTLRQAPDVILIGEIRDTETMEHAIAFAETGHLCLGTLH
ANNANQALDRIINFFPDERRNQLLMDLSSNMKAIISQRLVRTEDGRGRRAAVEIMLNTPLMSDLILKGNFHELKEVMSKS
RELGMQTFDQALFDLYNQGAIAYEEALRNADSVNELRLQIKLKSSRANPQLNSSSALSFDQAVAEKAKEAEEEKDDA

Nucleotide

• Length: 1194 bp

>NTDB_id=527956 I6I50_RS14015 WP_087013044.1 2872235..2873428(+) (pilU) [Acinetobacter johnsonii strain FDAARGOS_1093]
ATGTATTCTGCAGAACTTTTAGAAGAAGCCCGTCGGATGATGTTTCACATGCTCAGCAAAGTGGTTGAGTACGGTGGTTC
AGACTTATTTATATCTGCAGACTTTCCGCCAAGTATTAAGCATCAGGGCCTTATGAAGCCATTGGGTCAACAAAATTTGC
CATCTGATCAAACCAAACTCTTTGCTTATAGTTTAATGAACGAAAAGCAACGATTGGAGTTCGAAACCGAGCTTGAGTGT
AATTTTGCAATTAGCGTTCCCAATGTTTCGCGTTTTCGTGTCAATGTTTTTCAGCAGCAACTGCATGTGGGGATGGTGAT
TCGTACGATTACCGCGGAAATTCCTAACTTCACCAAGTTACAACTTCCAACGTCTTTAAAAGACGTGATTATGGAAAAAC
GTGGTTTAGTATTGGTAGTTGGGGGTACAGGGTCGGGTAAATCTACGTCTTTGGCGGCCATGATTGATCATCGAAATGAA
AACTCGGCAGGGCACATTATTACGGTTGAAGACCCAGTGGAATATGTTCACAAGCATAAGAAATCGATGATTACTCATCG
AGAAGTAGGTGTGGACTGTCACTCTTGGCACAATGCTTTGAAAAATACTTTGCGCCAAGCGCCCGATGTCATTTTAATTG
GTGAAATTCGTGACACGGAGACTATGGAGCATGCCATAGCTTTTGCAGAAACAGGCCACTTATGCCTAGGCACATTACAT
GCTAATAATGCAAATCAGGCTTTAGATCGAATTATTAACTTTTTCCCAGACGAACGTCGCAATCAACTTTTGATGGACTT
ATCTTCCAATATGAAGGCGATTATTTCACAGCGTCTGGTGCGAACTGAAGATGGTCGTGGTCGCCGAGCAGCAGTGGAAA
TCATGCTCAATACCCCGTTGATGTCAGACTTGATACTTAAAGGGAATTTCCATGAACTCAAAGAAGTGATGTCGAAGTCA
CGAGAGCTAGGTATGCAGACCTTTGATCAGGCTTTGTTTGATTTATACAATCAAGGTGCAATTGCTTATGAAGAAGCGCT
GCGAAATGCAGACTCGGTCAATGAATTACGTCTACAGATTAAATTAAAGAGTAGTCGTGCTAATCCACAGTTAAACTCAA
GTAGTGCTTTGTCTTTTGATCAAGCGGTTGCCGAAAAGGCCAAAGAAGCTGAAGAAGAGAAAGACGACGCTTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (122-282)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Pseudomonas stutzeri DSM 10701	59.331	90.428	0.537
pilU	Acinetobacter baylyi ADP1	54.821	91.436	0.501
pilU	Vibrio cholerae strain A1552	50.578	87.154	0.441
pilT	Legionella pneumophila strain Lp02	42.478	85.39	0.363
pilT	Legionella pneumophila strain ERS1305867	42.478	85.39	0.363
pilT	Acinetobacter baylyi ADP1	43.598	82.62	0.36