Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilA2   Type   Machinery gene
Locus tag   I6I53_RS03540 Genome accession   NZ_CP068176
Coordinates   633873..634268 (-) Length   131 a.a.
NCBI ID   WP_151725582.1    Uniprot ID   A0A2N6VGZ7
Organism   Acinetobacter ursingii strain FDAARGOS_1096     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 628873..639268
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6I53_RS03520 (I6I53_03525) - 628982..630115 (-) 1134 WP_201686678.1 Fic family protein -
  I6I53_RS03525 (I6I53_03530) - 630323..631987 (-) 1665 WP_126624256.1 PglL family O-oligosaccharyltransferase -
  I6I53_RS03530 (I6I53_03535) - 632173..632595 (-) 423 WP_126624255.1 hypothetical protein -
  I6I53_RS03535 (I6I53_03540) - 632589..633812 (-) 1224 WP_126624254.1 O-antigen ligase -
  I6I53_RS03540 (I6I53_03545) pilA2 633873..634268 (-) 396 WP_151725582.1 pilin Machinery gene
  I6I53_RS03545 (I6I53_03550) - 635054..635542 (+) 489 WP_151831451.1 pilin -
  I6I53_RS03550 (I6I53_03555) - 635574..635930 (-) 357 WP_151831452.1 hypothetical protein -
  I6I53_RS03555 (I6I53_03560) - 635934..637991 (-) 2058 WP_201686679.1 hypothetical protein -

Sequence

Protein


Download         Length: 131 a.a.        Molecular weight: 13253.15 Da        Isoelectric Point: 8.1010

>NTDB_id=527809 I6I53_RS03540 WP_151725582.1 633873..634268(-) (pilA2) [Acinetobacter ursingii strain FDAARGOS_1096]
MIVIAIIGILAAIAIPAYQDYTIRARVSEAITALSAAKATVSENIANNGGVIASGACNGYTNLASATANLTSTTCTDATG
VVVASTTAKAGGIQIKMTPTVNADKSVVWSCGTLASSYKYVPAECRNTVSF

Nucleotide


Download         Length: 396 bp        

>NTDB_id=527809 I6I53_RS03540 WP_151725582.1 633873..634268(-) (pilA2) [Acinetobacter ursingii strain FDAARGOS_1096]
ATGATCGTAATTGCGATTATTGGTATTTTGGCTGCAATTGCAATTCCTGCTTATCAGGATTATACAATTCGGGCACGTGT
ATCAGAAGCGATTACGGCATTGTCTGCTGCAAAAGCAACAGTAAGTGAAAATATTGCGAATAATGGTGGTGTAATTGCAT
CTGGTGCATGTAATGGTTATACAAATCTTGCTTCTGCTACGGCAAACCTAACGTCAACTACTTGTACTGATGCTACAGGT
GTGGTTGTGGCAAGTACCACTGCAAAAGCGGGTGGAATTCAAATTAAAATGACACCTACTGTGAACGCGGATAAATCAGT
AGTTTGGAGTTGTGGAACATTAGCATCTTCATATAAATATGTTCCAGCAGAATGTCGTAATACTGTTTCTTTCTAA

Domains

Predicted by InterproScan.

Pilin (bacterial filament) (Pilin)

(24-126)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2N6VGZ7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilA2 Legionella pneumophila strain ERS1305867

53.906

97.71

0.527
  pilA2 Legionella pneumophila str. Paris

53.906

97.71

0.527
  pilA Ralstonia pseudosolanacearum GMI1000

40

100

0.458
  comP Acinetobacter baylyi ADP1

46.341

93.893

0.435
  pilE Neisseria gonorrhoeae strain FA1090

36

100

0.412
  pilE Neisseria gonorrhoeae MS11

33.987

100

0.397