Detailed information    

insolico Bioinformatically predicted

Overview

Name   tsaP   Type   Machinery gene
Locus tag   KZ795_RS05795 Genome accession   NZ_CP080286
Coordinates   1271334..1272359 (+) Length   341 a.a.
NCBI ID   WP_003097294.1    Uniprot ID   A0A0H2ZJL6
Organism   Pseudomonas aeruginosa strain UNC_PaerCF12     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1266334..1277359
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KZ795_RS05775 (KZ795_05775) trkA 1266988..1268361 (-) 1374 WP_003107053.1 Trk system potassium transporter TrkA -
  KZ795_RS05780 (KZ795_05780) rsmB 1268389..1269693 (-) 1305 WP_073648830.1 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB -
  KZ795_RS05785 (KZ795_05785) fmt 1269690..1270634 (-) 945 WP_073648829.1 methionyl-tRNA formyltransferase -
  KZ795_RS05790 (KZ795_05790) def 1270689..1271195 (-) 507 WP_003107059.1 peptide deformylase -
  KZ795_RS05795 (KZ795_05795) tsaP 1271334..1272359 (+) 1026 WP_003097294.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  KZ795_RS05800 (KZ795_05800) dprA 1272494..1273582 (+) 1089 WP_003123764.1 DNA-processing protein DprA Machinery gene
  KZ795_RS05805 (KZ795_05805) - 1273623..1274180 (+) 558 WP_219833707.1 L-threonylcarbamoyladenylate synthase -
  KZ795_RS05810 (KZ795_05810) - 1274190..1275167 (-) 978 WP_033978596.1 NADPH:quinone reductase -
  KZ795_RS05815 (KZ795_05815) hemF 1275358..1276275 (+) 918 WP_003097311.1 oxygen-dependent coproporphyrinogen oxidase -
  KZ795_RS05820 (KZ795_05820) aroE 1276333..1277157 (+) 825 WP_033978595.1 shikimate dehydrogenase -

Sequence

Protein


Download         Length: 341 a.a.        Molecular weight: 37586.01 Da        Isoelectric Point: 9.3358

>NTDB_id=519161 KZ795_RS05795 WP_003097294.1 1271334..1272359(+) (tsaP) [Pseudomonas aeruginosa strain UNC_PaerCF12]
MRKSLVALLLLAASGLAQAQVDLREGHPDRYTVVRGDTLWDISGKFLRQPWKWPELWHANPQIQNPHLIYPGDTLSLVYV
DGQPRLVLNRGESRGTIKLSPKIRSTPIAEAIPTIPLDKINSFLLANRIVDDEKTFTSAPYIVAGNAERIVSGTGDRIYA
RGKFADGQPAYGIFRQGKVYIDPKTKEVLGINADDIGGGEVVATEGDVATLALTRTTQEVRLGDRLFPTEERAVNSTFMP
GEPSREVKGEIIDVPRGVTQIGQFDVVTLNRGQRDGLAEGNVLAIYKVGETVRDRVTGESVKIPDERAGLLMVFRTYKKL
SYALVLMASRPLSVTDRVQNP

Nucleotide


Download         Length: 1026 bp        

>NTDB_id=519161 KZ795_RS05795 WP_003097294.1 1271334..1272359(+) (tsaP) [Pseudomonas aeruginosa strain UNC_PaerCF12]
ATGAGGAAATCACTAGTCGCCCTTCTGCTCCTTGCCGCGAGCGGTCTGGCGCAGGCCCAGGTCGACCTCAGGGAAGGGCA
TCCGGACCGCTACACGGTGGTCAGGGGCGATACCCTGTGGGACATCTCGGGGAAATTCCTCCGCCAGCCATGGAAGTGGC
CGGAACTCTGGCACGCCAACCCGCAGATCCAGAATCCCCATCTGATCTACCCCGGCGACACCCTCAGCCTGGTCTACGTC
GATGGCCAGCCGCGCCTGGTGCTGAACCGTGGCGAATCGCGCGGGACCATCAAGCTGTCGCCGAAGATCCGCAGCACGCC
GATCGCCGAGGCCATCCCGACCATCCCGCTGGACAAGATCAACAGCTTCCTGCTGGCCAACCGCATCGTCGATGACGAGA
AGACCTTCACCAGTGCGCCGTACATCGTCGCCGGCAACGCCGAGCGGATCGTCAGCGGCACCGGCGACCGCATCTACGCT
CGCGGCAAGTTCGCCGACGGCCAGCCGGCCTATGGCATCTTCCGCCAGGGCAAGGTCTACATCGATCCGAAGACCAAGGA
AGTCCTCGGCATCAACGCCGACGACATCGGCGGCGGCGAGGTGGTGGCCACCGAAGGCGACGTCGCGACCCTGGCGCTGA
CCCGCACCACCCAGGAAGTGCGCCTGGGCGACCGCCTGTTCCCCACCGAGGAGCGTGCGGTGAATTCCACCTTCATGCCC
GGCGAGCCGAGCCGCGAGGTGAAGGGCGAAATCATCGACGTACCGCGCGGCGTGACCCAGATCGGCCAGTTCGACGTGGT
CACCCTGAACCGTGGCCAGCGCGACGGGCTGGCCGAGGGCAACGTGCTGGCGATCTACAAGGTCGGCGAGACGGTGCGCG
ACCGCGTTACCGGTGAGTCGGTGAAGATTCCCGACGAACGCGCCGGCCTGCTGATGGTGTTCCGTACCTACAAGAAACTG
AGCTACGCCCTGGTTCTGATGGCCAGCAGGCCGCTCTCGGTAACCGACAGGGTGCAGAATCCCTGA

Domains

Predicted by InterProScan.

LysM domain (LysM)

(31-76)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2ZJL6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tsaP Acinetobacter baumannii D1279779

36.512

100

0.393