Detailed information NTG0051868

Bioinformatically predicted

Overview

• Name: micB
• Type: Regulator
• Locus tag: SCIM_RS03780
• Genome accession: NC_018073
• Coordinates: 786429..787781 (+)
• Length: 450 a.a.
• NCBI ID: WP_003072979.1
• Uniprot ID: -
• Organism: Streptococcus intermedius JTH08
• Function: repress competence development (predicted from homology) Competence regulation

Genomic Context

Location: 781429..792781

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SCIM_RS03755 (SCIM_0671)	ccpA	781659..782663 (+)	1005	WP_003075707.1	catabolite control protein A	Regulator
SCIM_RS03760 (SCIM_0672)	-	782756..783754 (+)	999	WP_003072984.1	glycosyltransferase family 4 protein	-
SCIM_RS03765 (SCIM_0673)	-	783756..785069 (+)	1314	WP_003075701.1	glycosyltransferase family 4 protein	-
SCIM_RS03770 (SCIM_0674)	-	785096..785437 (+)	342	WP_003075698.1	hypothetical protein	-
SCIM_RS03775 (SCIM_0675)	micA	785735..786436 (+)	702	WP_003072980.1	response regulator YycF	Regulator
SCIM_RS03780 (SCIM_0676)	micB	786429..787781 (+)	1353	WP_003072979.1	cell wall metabolism sensor histidine kinase VicK	Regulator
SCIM_RS03785 (SCIM_0677)	vicX	787783..788586 (+)	804	WP_003075634.1	MBL fold metallo-hydrolase	Regulator
SCIM_RS03790 (SCIM_0678)	-	788595..788954 (+)	360	WP_003072977.1	YbaN family protein	-
SCIM_RS03795 (SCIM_0679)	rnc	789343..790041 (+)	699	WP_003072976.1	ribonuclease III	-

Sequence

Protein

• Length: 450 a.a.
• Molecular weight: 51225.43 Da
• Isoelectric Point: 4.7207

>NTDB_id=51868 SCIM_RS03780 WP_003072979.1 786429..787781(+) (micB) [Streptococcus intermedius JTH08]
MIDNIRQFVVSKDFVFVLLILGFILVITLLSLENRRDNVRIRQLNQKVKDLIAGDYSEVLDMQGGPEITDITNSINDLSE
VIRLTHENLEQETKRLSSILSYMTDGVLATNRRGQIIMINDMATKQLGVKESDARKMNILKLLGIEDEYDLRDLITKVPE
LTIDSQDENGEFLSLRVRFALIRRESGFISGLVAVLHDTTEQEKEERERRLFVSNVSHELRTPLTSVKSYLEALDEGALS
EPVAPDFIKVSLDETNRMMRMVSDLLSLSRIDNATSHLDIELTNFTAFITFILNRFDKIRSQNDDKKYEIIRDYPINSTW
VEIDTDKMTQVIDNIINNAIKYSPDGGKITVSMKTTETQMILSISDEGLGIPKKDLPKIFDRFYRVDKARSRAQGGSGLG
LAIAKEIIKQHNGFIWAKSEYGKGSTFTIVLPYDKEAVKDDDWEEDGLEG

Nucleotide

• Length: 1353 bp

>NTDB_id=51868 SCIM_RS03780 WP_003072979.1 786429..787781(+) (micB) [Streptococcus intermedius JTH08]
ATGATTGATAATATAAGACAATTTGTCGTATCAAAAGATTTTGTATTTGTCCTACTCATTTTAGGATTTATTTTGGTCAT
TACGTTGCTGTCCTTGGAAAATCGACGTGATAATGTTCGTATTCGCCAATTGAATCAAAAAGTGAAAGACTTAATTGCGG
GAGATTATTCAGAAGTTTTAGATATGCAAGGTGGTCCAGAAATCACTGACATTACCAATAGTATCAATGATTTATCTGAA
GTGATTCGCTTAACGCATGAAAATTTAGAACAAGAAACTAAGAGGTTATCAAGTATCTTGTCCTACATGACGGACGGTGT
CCTTGCGACCAATCGTCGTGGGCAAATTATCATGATCAATGATATGGCGACCAAGCAGTTGGGAGTCAAGGAATCTGATG
CACGAAAGATGAATATCTTAAAACTGTTGGGGATTGAAGATGAATATGATTTACGGGACTTGATTACGAAAGTTCCAGAG
CTGACCATTGATTCACAGGATGAAAATGGAGAATTTTTAAGCCTGCGTGTTCGCTTTGCCTTGATTCGTCGAGAGTCAGG
CTTTATTTCTGGGTTGGTTGCAGTGTTGCATGATACAACGGAGCAGGAAAAAGAGGAACGTGAGCGGAGACTATTTGTTT
CTAATGTCAGTCATGAATTGCGTACTCCCTTGACCAGTGTCAAGTCTTATCTGGAAGCATTAGATGAAGGCGCTTTGTCT
GAGCCGGTTGCGCCAGATTTCATCAAGGTTTCGTTAGATGAAACCAATCGGATGATGCGAATGGTTTCGGACTTACTGAG
TTTGTCGCGGATTGATAATGCGACTAGCCATTTGGATATTGAACTGACAAATTTTACAGCTTTCATCACATTTATTTTGA
ATCGTTTTGACAAGATTAGAAGTCAGAACGATGATAAAAAGTACGAAATTATCCGAGATTATCCAATTAATTCTACTTGG
GTCGAAATTGATACAGATAAAATGACACAAGTTATTGATAATATTATCAATAATGCCATTAAATATTCTCCTGATGGTGG
TAAGATTACGGTGAGTATGAAAACAACTGAGACCCAAATGATTTTATCTATATCAGATGAAGGTTTAGGAATTCCCAAAA
AAGATTTACCAAAAATTTTTGATCGATTTTATCGTGTAGACAAAGCGAGAAGTCGTGCACAAGGTGGATCGGGACTGGGC
TTGGCCATTGCTAAAGAAATTATCAAGCAGCATAACGGTTTTATCTGGGCGAAGAGTGAATATGGTAAAGGATCGACATT
TACAATCGTTCTGCCTTATGACAAAGAAGCTGTCAAAGATGATGATTGGGAAGAAGATGGATTAGAAGGATAG

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (324-434)

• His Kinase A (phospho-acceptor) domain (HisKA) (209-273)

• PAS fold (PAS) (95-198)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
micB	Streptococcus pneumoniae Cp1015	81.549	97.556	0.796
vicK	Streptococcus mutans UA159	71.149	90.889	0.647