Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiA3   Type   Regulator
Locus tag   I6H72_RS08220 Genome accession   NZ_CP066055
Coordinates   1631996..1633975 (+) Length   659 a.a.
NCBI ID   WP_198457823.1    Uniprot ID   -
Organism   Streptococcus constellatus strain FDAARGOS_1015     
Function   binding to XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 1626996..1638975
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6H72_RS08205 (I6H72_08205) - 1627135..1628745 (+) 1611 WP_126467591.1 CTP synthase -
  I6H72_RS08210 (I6H72_08210) - 1628979..1629665 (+) 687 WP_198458433.1 B3/4 domain-containing protein -
  I6H72_RS08215 (I6H72_08215) amiA3 1629824..1631800 (+) 1977 WP_198457822.1 peptide ABC transporter substrate-binding protein Regulator
  I6H72_RS08220 (I6H72_08220) amiA3 1631996..1633975 (+) 1980 WP_198457823.1 peptide ABC transporter substrate-binding protein Regulator
  I6H72_RS08225 (I6H72_08225) amiC 1634339..1635835 (+) 1497 WP_006268182.1 ABC transporter permease Regulator
  I6H72_RS08230 (I6H72_08230) amiD 1635835..1636761 (+) 927 WP_198457824.1 oligopeptide ABC transporter permease OppC Regulator
  I6H72_RS08235 (I6H72_08235) amiE 1636770..1637837 (+) 1068 WP_006268109.1 ABC transporter ATP-binding protein Regulator
  I6H72_RS08240 (I6H72_08240) amiF 1637848..1638771 (+) 924 WP_198457825.1 ATP-binding cassette domain-containing protein Regulator

Sequence

Protein


Download         Length: 659 a.a.        Molecular weight: 73389.20 Da        Isoelectric Point: 8.3266

>NTDB_id=516882 I6H72_RS08220 WP_198457823.1 1631996..1633975(+) (amiA3) [Streptococcus constellatus strain FDAARGOS_1015]
MKKSKIIALAAVTLLTAGALTACSGSKTSSSNKTFSYVYEQDPDNLDYLTTGKASTSNITSNVIDGLLENDRYGKLIPSV
AKDWTVSKDGLTYTYKLRKGVKWYTSEGEEYAEVKAQDFVTGLKHAADKKSDAIYLVQDSIKGLDAYMKGENKDFSSVGI
KAVDDYTVQYTLNRPESFWNSKTTMGVLAPVNAEFLKSKGNKFAQATDPSSLLYNGPYLLKSITAKSSVELAKNPNYWDK
KNVHIDNIKLSYYDGQDQDKLAKGFSDGSFTNAKVFPTSPSYASVSKKYKNNIVYTPQDATTYLVATNIDRQSYNHTSKT
TDAQKTSTKKALLNKDFRQAITFAFDRTAYASQVNGKDGATKMLRNLFVPPTFVQTDDKNFGELVKEKLVSYDESWKDVN
LNDAQDGLYNPTKAKEKLAKAKAALQADGVQFPIHIDMPVDQTATNKVQRVQSLKQLIEKNLGKENVVIDIQQMSKDDVN
NITYFAESAAAEDWDLSDNVGWSPDFQDPSTYLDIIKPSSGESTKTYLGFDAGTNNAAAAQVGMNEYEKLLNEAEKETTN
TNARYEKYAAAQAWLTDNALVIPTTTLTGRPILSRTVPFTNPFAWSGNKGNSEIILYKYLELQEEPVTQDQYKKAMTKWN
KERSKSNKKVQEELADHVK

Nucleotide


Download         Length: 1980 bp        

>NTDB_id=516882 I6H72_RS08220 WP_198457823.1 1631996..1633975(+) (amiA3) [Streptococcus constellatus strain FDAARGOS_1015]
ATGAAGAAAAGTAAAATCATTGCTTTAGCGGCTGTTACCCTACTTACAGCAGGAGCCTTAACGGCTTGTTCTGGCTCTAA
AACAAGTTCTAGCAACAAAACATTTTCATATGTTTATGAGCAAGATCCAGATAATTTGGATTATTTGACAACTGGGAAGG
CCTCTACTTCAAATATTACAAGTAATGTCATTGATGGACTCTTAGAAAATGACCGTTACGGAAAATTAATCCCTTCTGTG
GCAAAGGATTGGACGGTTTCCAAAGATGGCTTGACTTACACTTATAAACTTCGTAAAGGTGTCAAATGGTATACATCTGA
AGGTGAAGAGTATGCCGAAGTCAAAGCGCAAGACTTTGTGACTGGTTTGAAACACGCTGCAGATAAGAAATCCGATGCTA
TTTATTTGGTACAAGATTCAATCAAAGGCTTGGATGCTTACATGAAGGGTGAAAATAAAGATTTCTCTTCTGTCGGTATC
AAAGCGGTTGATGATTATACGGTTCAATATACTCTGAACCGACCAGAAAGCTTTTGGAACTCAAAAACAACAATGGGCGT
TTTAGCGCCAGTTAATGCAGAATTTTTGAAATCAAAAGGAAATAAATTTGCACAAGCAACAGACCCATCTAGTCTTCTTT
ATAATGGACCATACTTGCTAAAATCTATCACTGCAAAATCATCTGTTGAATTGGCTAAAAATCCAAACTATTGGGATAAG
AAAAATGTACACATTGATAACATCAAATTGTCTTACTATGATGGTCAAGACCAAGATAAACTTGCTAAAGGATTTAGTGA
CGGTTCATTTACCAATGCAAAAGTATTTCCAACTAGTCCAAGTTATGCTTCCGTCAGCAAGAAATACAAAAACAACATCG
TTTATACTCCACAAGATGCAACCACTTATCTAGTGGCTACAAACATCGATCGTCAATCTTACAATCATACATCAAAGACA
ACAGATGCTCAAAAGACATCTACTAAGAAAGCATTATTGAATAAAGATTTCCGTCAAGCAATTACATTTGCATTTGACCG
TACTGCTTATGCTTCACAGGTGAATGGTAAAGATGGTGCGACAAAGATGCTTCGTAATCTCTTTGTACCACCAACTTTTG
TTCAAACAGATGATAAGAACTTTGGAGAATTGGTCAAAGAAAAATTAGTCAGCTACGATGAAAGTTGGAAAGATGTCAAC
TTAAATGATGCGCAAGACGGTCTTTACAATCCAACGAAAGCCAAGGAAAAATTAGCCAAAGCGAAAGCAGCGCTTCAAGC
AGACGGTGTTCAATTCCCGATTCACATTGATATGCCAGTTGACCAAACGGCAACGAATAAAGTTCAACGTGTACAATCAT
TGAAACAATTGATTGAAAAAAATCTTGGCAAAGAAAATGTTGTGATTGATATTCAACAAATGTCTAAAGACGATGTAAAT
AATATCACTTACTTTGCTGAATCTGCAGCTGCAGAAGATTGGGATCTTTCTGATAATGTTGGTTGGAGTCCAGACTTCCA
AGATCCATCTACCTATCTTGATATCATCAAACCTTCAAGCGGTGAAAGCACAAAGACTTATCTAGGATTTGATGCAGGTA
CGAATAACGCTGCAGCAGCACAAGTCGGTATGAACGAATATGAAAAGCTGTTGAACGAGGCTGAAAAAGAAACCACTAAT
ACGAATGCACGCTATGAAAAATATGCGGCAGCCCAAGCTTGGTTGACTGACAATGCATTAGTTATTCCAACAACAACGCT
AACGGGTCGCCCAATTCTTTCTCGCACAGTGCCATTTACTAATCCATTTGCTTGGTCAGGAAACAAAGGGAATAGTGAAA
TCATTCTATATAAATATCTTGAACTCCAAGAAGAGCCTGTTACACAAGATCAGTACAAGAAAGCTATGACTAAATGGAAT
AAAGAGCGATCAAAATCTAATAAAAAAGTTCAAGAAGAACTTGCAGATCATGTTAAATAA

Domains

Predicted by InterproScan.

Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5)

(75-520)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiA3 Streptococcus thermophilus LMD-9

61.667

100

0.618
  amiA Streptococcus salivarius strain HSISS4

61.364

100

0.615
  amiA3 Streptococcus thermophilus LMG 18311

61.061

100

0.612