Detailed information    

insolico Bioinformatically predicted

Overview


Name   amiE   Type   Regulator
Locus tag   I6H72_RS08235 Genome accession   NZ_CP066055
Coordinates   1636770..1637837 (+) Length   355 a.a.
NCBI ID   WP_006268109.1    Uniprot ID   F9P7H5
Organism   Streptococcus constellatus strain FDAARGOS_1015     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1631770..1642837
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6H72_RS08220 (I6H72_08220) amiA3 1631996..1633975 (+) 1980 WP_198457823.1 peptide ABC transporter substrate-binding protein Regulator
  I6H72_RS08225 (I6H72_08225) amiC 1634339..1635835 (+) 1497 WP_006268182.1 ABC transporter permease Regulator
  I6H72_RS08230 (I6H72_08230) amiD 1635835..1636761 (+) 927 WP_198457824.1 oligopeptide ABC transporter permease OppC Regulator
  I6H72_RS08235 (I6H72_08235) amiE 1636770..1637837 (+) 1068 WP_006268109.1 ABC transporter ATP-binding protein Regulator
  I6H72_RS08240 (I6H72_08240) amiF 1637848..1638771 (+) 924 WP_198457825.1 ATP-binding cassette domain-containing protein Regulator
  I6H72_RS08245 (I6H72_08245) - 1638914..1639738 (+) 825 Protein_1609 Cof-type HAD-IIB family hydrolase -
  I6H72_RS08250 (I6H72_08250) - 1639808..1640773 (-) 966 WP_058669830.1 LacI family DNA-binding transcriptional regulator -
  I6H72_RS08255 (I6H72_08255) - 1640754..1642208 (-) 1455 WP_198457826.1 sucrose-6-phosphate hydrolase -

Sequence


Protein


Download         Length: 355 a.a.        Molecular weight: 39582.24 Da        Isoelectric Point: 4.7899

>NTDB_id=516885 I6H72_RS08235 WP_006268109.1 1636770..1637837(+) (amiE) [Streptococcus constellatus strain FDAARGOS_1015]
MTQEKNVILTARDIVVEFDVRDKVLTAIRGVSLDLIEGEVLALVGESGSGKSVLTKTFTGMLEDNGRVAQGSINYRGQDL
TKLKSNKDWEPIRGVKIATIFQDPMTSLDPINTIGSQITEVIVKHQKKTAKEAKEMAIDYMNKVGIPDAEKRFSEYPFQY
SGGMRQRIVIAIALACRPDILICDEPTTALDVTIQAQIIDLLKSLQQEYQFTTIFITHDLGVVASIADKVAVMYAGEIVE
YGTVEDVFYDPRHPYTWSLLSSLPQLADDKGELYSIPGTPPSLYSHLQGDAFALRSDYAMEIDFEEKPPQIYVSDTHWAK
TWLLHENAPKVNKPAVIDDLHEKISSKMGFAHLDA

Nucleotide


Download         Length: 1068 bp        

>NTDB_id=516885 I6H72_RS08235 WP_006268109.1 1636770..1637837(+) (amiE) [Streptococcus constellatus strain FDAARGOS_1015]
ATGACACAAGAAAAAAATGTAATATTGACTGCCCGCGATATTGTCGTGGAATTTGACGTTCGTGATAAAGTCTTAACCGC
CATTCGTGGTGTATCACTTGACCTCATCGAAGGTGAAGTTCTTGCTCTCGTAGGAGAGTCAGGTTCTGGTAAATCTGTTT
TAACAAAGACTTTTACTGGAATGTTAGAGGATAATGGTCGAGTAGCGCAAGGATCGATTAACTATCGTGGACAAGATTTG
ACAAAATTGAAATCCAATAAAGATTGGGAACCTATTCGTGGTGTTAAAATTGCGACTATTTTCCAAGACCCAATGACAAG
TTTAGACCCAATTAACACGATTGGTAGCCAGATTACAGAAGTTATTGTAAAACATCAAAAGAAAACGGCAAAAGAAGCGA
AGGAAATGGCTATTGACTATATGAATAAAGTCGGTATTCCTGATGCTGAAAAGCGTTTTAGTGAGTATCCTTTCCAATAT
TCAGGAGGAATGCGTCAACGGATCGTTATTGCCATTGCGCTTGCTTGTCGTCCTGATATCCTAATCTGTGATGAACCTAC
AACAGCGCTTGATGTTACCATTCAAGCACAAATCATTGATTTGTTGAAATCATTGCAACAAGAGTATCAATTCACTACTA
TTTTTATCACCCACGACCTTGGAGTGGTAGCAAGTATTGCGGATAAAGTTGCCGTTATGTATGCTGGAGAAATCGTCGAG
TATGGTACAGTAGAAGACGTCTTTTATGATCCACGTCATCCTTATACTTGGAGCTTGTTATCAAGCTTGCCACAGTTGGC
AGATGATAAAGGAGAGCTTTACTCTATTCCTGGCACACCGCCGTCTCTTTATTCACACTTGCAAGGAGATGCTTTCGCTC
TTCGTTCAGATTATGCGATGGAAATTGATTTTGAGGAAAAACCACCTCAAATCTATGTATCAGATACACATTGGGCAAAA
ACGTGGTTGCTTCATGAAAATGCTCCAAAAGTGAATAAACCTGCTGTTATTGATGATTTACATGAAAAAATTAGCTCAAA
AATGGGTTTTGCTCATTTAGACGCTTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB F9P7H5

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiE Streptococcus salivarius strain HSISS4

86.402

99.437

0.859

  amiE Streptococcus thermophilus LMG 18311

84.986

99.437

0.845

  amiE Streptococcus thermophilus LMD-9

84.986

99.437

0.845

  oppD Streptococcus mutans UA159

55.65

99.718

0.555