Detailed information    

insolico Bioinformatically predicted

Overview

Name   comGG/cglG   Type   Machinery gene
Locus tag   I6H77_RS03355 Genome accession   NZ_CP066021
Coordinates   695350..695763 (-) Length   137 a.a.
NCBI ID   WP_000265647.1    Uniprot ID   A0A1X1HAR6
Organism   Streptococcus oralis strain FDAARGOS_1020     
Function   dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 690350..700763
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6H77_RS03330 (I6H77_03330) - 691151..691978 (-) 828 WP_000728097.1 membrane protein insertase YidC -
  I6H77_RS03335 (I6H77_03335) rnpA 691953..692324 (-) 372 WP_000748120.1 ribonuclease P protein component -
  I6H77_RS03340 (I6H77_03340) - 692474..693664 (-) 1191 WP_000167789.1 acetate kinase -
  I6H77_RS03345 (I6H77_03345) comYH 693716..694669 (-) 954 WP_000345144.1 class I SAM-dependent methyltransferase Machinery gene
  I6H77_RS03350 (I6H77_03350) - 694730..695317 (-) 588 WP_000679790.1 class I SAM-dependent methyltransferase -
  I6H77_RS03355 (I6H77_03355) comGG/cglG 695350..695763 (-) 414 WP_000265647.1 competence type IV pilus minor pilin ComGG Machinery gene
  I6H77_RS03360 (I6H77_03360) comGF/cglF 695741..696202 (-) 462 WP_002875275.1 competence type IV pilus minor pilin ComGF Machinery gene
  I6H77_RS03365 (I6H77_03365) comGE/cglE 696165..696467 (-) 303 WP_000413369.1 competence type IV pilus minor pilin ComGE Machinery gene
  I6H77_RS03370 (I6H77_03370) comGD/cglD 696430..696864 (-) 435 WP_001180060.1 competence type IV pilus minor pilin ComGD Machinery gene
  I6H77_RS03375 (I6H77_03375) comGC/cglC 696827..697150 (-) 324 WP_000735794.1 competence type IV pilus major pilin ComGC Machinery gene
  I6H77_RS03380 (I6H77_03380) comGB/cglB 697152..698168 (-) 1017 WP_002875106.1 competence type IV pilus assembly protein ComGB Machinery gene
  I6H77_RS03385 (I6H77_03385) comGA/cglA/cilD 698116..699057 (-) 942 WP_000249583.1 competence type IV pilus ATPase ComGA Machinery gene
  I6H77_RS03390 (I6H77_03390) - 699119..699484 (-) 366 WP_000286399.1 DUF1033 family protein -

Sequence

Protein


Download         Length: 137 a.a.        Molecular weight: 15762.19 Da        Isoelectric Point: 10.5741

>NTDB_id=516456 I6H77_RS03355 WP_000265647.1 695350..695763(-) (comGG/cglG) [Streptococcus oralis strain FDAARGOS_1020]
MWKKQKVKAGVLLYAVTMAAIFSLLLQFYLNRQVAHHKDFALNKEKLIAFAMAKRSKDKAEQESGERVFNLGKVRYQNTK
TGFATSVRMNKGNYEFLFPTMKTQEKKTAKKEEVATDSSNQAEKKKSEEKSEKKDNS

Nucleotide


Download         Length: 414 bp        

>NTDB_id=516456 I6H77_RS03355 WP_000265647.1 695350..695763(-) (comGG/cglG) [Streptococcus oralis strain FDAARGOS_1020]
GTGTGGAAAAAACAAAAAGTTAAGGCAGGCGTTCTTTTATATGCAGTCACCATGGCAGCCATCTTTAGTCTGTTGTTGCA
GTTTTATTTAAATCGGCAAGTCGCCCATCACAAAGACTTTGCCCTAAACAAAGAAAAGTTGATCGCTTTTGCCATGGCCA
AGCGAAGTAAGGATAAGGCTGAGCAAGAAAGTGGAGAACGAGTCTTTAACTTAGGAAAAGTCAGATATCAAAATACGAAA
ACAGGTTTTGCAACAAGTGTTCGTATGAATAAGGGCAACTATGAATTTCTCTTTCCTACGATGAAAACCCAAGAAAAGAA
AACAGCTAAAAAGGAAGAGGTAGCGACTGATTCAAGCAATCAAGCAGAGAAGAAAAAATCAGAAGAGAAGTCTGAAAAGA
AAGACAATTCCTAG

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1X1HAR6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comGG/cglG Streptococcus mitis SK321

77.372

100

0.774
  comGG/cglG Streptococcus mitis NCTC 12261

76.23

89.051

0.679
  comGG/cglG Streptococcus pneumoniae Rx1

76.923

85.401

0.657
  comGG/cglG Streptococcus pneumoniae D39

76.923

85.401

0.657
  comGG/cglG Streptococcus pneumoniae R6

76.923

85.401

0.657
  comGG/cglG Streptococcus pneumoniae TIGR4

76.923

85.401

0.657