Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilV   Type   Regulator
Locus tag   KZH42_RS05305 Genome accession   NZ_CP079941
Coordinates   1046028..1046648 (+) Length   206 a.a.
NCBI ID   WP_002225360.1    Uniprot ID   -
Organism   Neisseria meningitidis strain C311     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1041028..1051648
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KZH42_RS11990 - 1041028..1041135 (+) 108 Protein_1024 IS5/IS1182 family transposase -
  KZH42_RS05280 (KZH42_05280) - 1041180..1041512 (+) 333 WP_002225363.1 hypothetical protein -
  KZH42_RS05285 (KZH42_05285) - 1041844..1042353 (+) 510 WP_002213852.1 isoprenylcysteine carboxyl methyltransferase family protein -
  KZH42_RS05290 (KZH42_05290) - 1042870..1043457 (-) 588 WP_002220670.1 superoxide dismutase -
  KZH42_RS05295 (KZH42_05295) dnaB 1043621..1045027 (+) 1407 WP_002225362.1 replicative DNA helicase -
  KZH42_RS05300 (KZH42_05300) pilH 1045336..1046004 (+) 669 WP_002230433.1 Tfp pilus assembly protein FimT/FimU Machinery gene
  KZH42_RS05305 (KZH42_05305) pilV 1046028..1046648 (+) 621 WP_002225360.1 type IV pilus modification protein PilV Regulator
  KZH42_RS05310 (KZH42_05310) pilJ 1046645..1047586 (+) 942 WP_002244084.1 PilW family protein Machinery gene
  KZH42_RS05315 (KZH42_05315) pilK 1047565..1048158 (+) 594 WP_002244085.1 PilX N-terminal domain-containing pilus assembly protein Machinery gene
  KZH42_RS05320 (KZH42_05320) pilX 1048163..1048636 (+) 474 WP_002225356.1 PilX family type IV pilin Machinery gene
  KZH42_RS05325 (KZH42_05325) - 1050405..1050773 (-) 369 Protein_1034 AzlC family ABC transporter permease -
  KZH42_RS05330 (KZH42_05330) dut 1050973..1051425 (+) 453 WP_002225353.1 dUTP diphosphatase -

Sequence

Protein


Download         Length: 206 a.a.        Molecular weight: 22325.27 Da        Isoelectric Point: 4.9868

>NTDB_id=515864 KZH42_RS05305 WP_002225360.1 1046028..1046648(+) (pilV) [Neisseria meningitidis strain C311]
MKNNDCFRLKDSQSGMALIEVLVAMLVLTIGILALLSVQLRTVASVREAETQTIVSQITQNLMEGMLMNPTIDSDSNKKN
YNLYMGNHTLPHTLSAVDGDFAIDAMKTKGQLAEAQLKRFSYELKNALPDAAAIHYAVCKDSSGNAPTLSGNAFSSNCDN
KANGDTLIKVLWVNDSAGDSDISRTNLEVSGDNIVYTYQARVGGRE

Nucleotide


Download         Length: 621 bp        

>NTDB_id=515864 KZH42_RS05305 WP_002225360.1 1046028..1046648(+) (pilV) [Neisseria meningitidis strain C311]
ATGAAGAATAATGATTGCTTCCGCCTGAAAGATTCCCAGTCCGGTATGGCGCTGATAGAAGTCTTGGTTGCTATGCTCGT
TCTGACCATCGGTATTTTGGCACTATTGTCTGTACAGTTGCGGACAGTCGCTTCCGTCAGGGAGGCGGAGACACAAACCA
TCGTCAGCCAAATCACGCAAAACCTGATGGAGGGAATGTTGATGAATCCGACCATTGATTCGGACAGCAACAAGAAAAAC
TATAATCTTTACATGGGAAACCATACACTACCGCATACACTATCAGCTGTGGATGGCGATTTTGCGATTGATGCCATGAA
AACTAAGGGGCAATTGGCAGAGGCACAATTGAAGAGATTTAGTTATGAGCTGAAAAATGCCTTGCCGGATGCGGCAGCCA
TCCATTACGCCGTCTGCAAGGATTCGTCGGGTAACGCGCCGACATTGTCCGGCAATGCTTTTTCTTCAAATTGCGACAAT
AAGGCAAACGGGGATACTTTAATTAAAGTATTGTGGGTAAATGATTCGGCAGGGGATTCGGATATTTCCCGTACGAATCT
TGAGGTGAGCGGCGACAATATCGTATATACTTATCAGGCAAGGGTCGGAGGTCGGGAATGA

Domains

Predicted by InterProScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(12-36)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilV Neisseria meningitidis 8013

98.544

100

0.985
  pilV/pilI Neisseria gonorrhoeae MS11

83.01

100

0.83