Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   I6H71_RS07115 Genome accession   NZ_CP065980
Coordinates   1517764..1518807 (+) Length   347 a.a.
NCBI ID   WP_103207603.1    Uniprot ID   A0A2K3ZIM8
Organism   Staphylococcus felis strain FDAARGOS_1014     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1512764..1523807
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6H71_RS07090 (I6H71_07090) - 1513908..1514633 (+) 726 WP_103207595.1 type 1 glutamine amidotransferase -
  I6H71_RS07095 (I6H71_07095) - 1514713..1515711 (-) 999 WP_103207596.1 FUSC family protein -
  I6H71_RS07100 (I6H71_07100) map 1515808..1516569 (+) 762 WP_103207598.1 type I methionyl aminopeptidase -
  I6H71_RS07105 (I6H71_07105) - 1516664..1517053 (+) 390 WP_103207599.1 hypothetical protein -
  I6H71_RS07110 (I6H71_07110) liaF 1517066..1517767 (+) 702 WP_103207601.1 cell wall-active antibiotics response protein LiaF -
  I6H71_RS07115 (I6H71_07115) vraS 1517764..1518807 (+) 1044 WP_103207603.1 sensor histidine kinase Regulator
  I6H71_RS07120 (I6H71_07120) vraR 1518797..1519426 (+) 630 WP_103207605.1 response regulator Regulator
  I6H71_RS07125 (I6H71_07125) - 1519513..1520085 (-) 573 WP_103207607.1 beta-class carbonic anhydrase -
  I6H71_RS07130 (I6H71_07130) - 1520116..1521339 (-) 1224 WP_103207609.1 YihY/virulence factor BrkB family protein -
  I6H71_RS07135 (I6H71_07135) - 1521702..1521989 (-) 288 WP_103207611.1 YtxH domain-containing protein -
  I6H71_RS07140 (I6H71_07140) - 1521991..1522455 (-) 465 WP_103207612.1 low molecular weight protein-tyrosine-phosphatase -
  I6H71_RS07145 (I6H71_07145) - 1522590..1522799 (+) 210 WP_262633092.1 DUF1128 domain-containing protein -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 40184.49 Da        Isoelectric Point: 5.1680

>NTDB_id=515866 I6H71_RS07115 WP_103207603.1 1517764..1518807(+) (vraS) [Staphylococcus felis strain FDAARGOS_1014]
MNHYVRTIGSMLILVYSMFTAFFFIDKVFVNIIFFQGMFYTQIFGIPVFLFLNLIVIFLCIIVGSVIAYKINQQNDWLQQ
QIERAFEGETVGVNDQQLELYNETLEIYRSLVPLNQELHKMRIKTQNLTNESYNLNDIKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETNLNPPLDQQIPTLEKMIQDSQLEMRALLLHLRPIGLKDKSLGEGIRSLVTELQKKVPMKVIQEI
DEFDVPKGIEDHLFRITQEAISNTLRHAKGEQVTVELLKREDYLLLRIQDDGIGFNVDDKIEQSYGLKNMRERAIEIGAT
FHIVSLPDAGTRIEVKAPLEKEESHDN

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=515866 I6H71_RS07115 WP_103207603.1 1517764..1518807(+) (vraS) [Staphylococcus felis strain FDAARGOS_1014]
ATGAATCACTATGTCAGAACGATTGGATCAATGCTCATACTAGTTTACAGTATGTTTACAGCTTTCTTTTTTATCGATAA
AGTTTTTGTGAATATCATATTTTTTCAAGGTATGTTTTACACTCAAATCTTCGGTATTCCTGTATTTTTATTTCTTAACT
TAATTGTCATTTTTTTGTGTATTATTGTGGGTAGTGTAATAGCGTATAAGATTAATCAACAAAATGATTGGTTACAACAA
CAGATTGAGCGTGCATTTGAAGGTGAAACAGTCGGTGTTAACGATCAGCAACTAGAGCTGTATAATGAAACATTAGAGAT
TTACCGTTCATTGGTACCGCTCAATCAAGAATTACATAAAATGCGAATTAAAACTCAAAATTTGACAAATGAATCTTATA
ACTTAAATGATATAAAAGTAAAAAAAATAATTGAAGATGAACGTCAACGGTTAGCTAGAGAGCTTCACGATAGCGTTTCG
CAGCAATTGTTTGCAGCTAGTATGATGTTATCAGCTATTAAAGAAACAAACTTAAATCCACCACTTGATCAACAGATACC
AACACTTGAAAAAATGATTCAAGACTCACAACTTGAAATGAGAGCATTATTATTACACCTACGTCCAATAGGTTTGAAGG
ATAAATCATTAGGTGAAGGCATACGATCGTTAGTGACTGAATTACAAAAGAAAGTACCTATGAAAGTTATACAAGAAATT
GATGAGTTTGATGTTCCAAAGGGTATAGAAGATCACTTATTTAGAATCACACAAGAGGCAATCTCCAATACGTTACGTCA
TGCTAAGGGTGAACAAGTGACGGTTGAATTGTTAAAAAGAGAAGACTATTTATTATTGCGTATTCAAGATGATGGTATCG
GCTTTAATGTGGACGATAAAATTGAACAAAGTTATGGTTTGAAAAATATGCGTGAAAGAGCAATTGAAATTGGTGCAACT
TTTCATATCGTCTCTTTGCCTGATGCAGGAACACGTATCGAGGTTAAAGCACCATTAGAAAAGGAGGAAAGTCATGACAA
TTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A2K3ZIM8

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

82.997

100

0.83