Detailed information    

insolico Bioinformatically predicted

Overview

Name   agrA   Type   Regulator
Locus tag   I6H71_RS06760 Genome accession   NZ_CP065980
Coordinates   1447362..1448078 (-) Length   238 a.a.
NCBI ID   WP_103207458.1    Uniprot ID   A0AAQ0HQG5
Organism   Staphylococcus felis strain FDAARGOS_1014     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1442362..1453078
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6H71_RS06740 (I6H71_06740) - 1442936..1443580 (+) 645 WP_103207451.1 redox-sensing transcriptional repressor Rex -
  I6H71_RS06745 (I6H71_06745) - 1444246..1445322 (+) 1077 WP_103207453.1 YeeE/YedE family protein -
  I6H71_RS06750 (I6H71_06750) - 1445340..1445564 (+) 225 WP_103207455.1 sulfurtransferase TusA family protein -
  I6H71_RS06755 (I6H71_06755) - 1445789..1447273 (+) 1485 WP_103207456.1 sucrose-6-phosphate hydrolase -
  I6H71_RS06760 (I6H71_06760) agrA 1447362..1448078 (-) 717 WP_103207458.1 quorum-sensing response regulator AgrA Regulator
  I6H71_RS06765 (I6H71_06765) agrC 1448093..1449390 (-) 1298 Protein_1321 quorum-sensing sensor histidine kinase AgrC -
  I6H71_RS06770 (I6H71_06770) agrD 1449426..1449563 (-) 138 WP_103207460.1 cyclic lactone autoinducer peptide AgrD -
  I6H71_RS06775 (I6H71_06775) - 1449566..1450132 (-) 567 WP_103207462.1 accessory gene regulator AgrB -
  I6H71_RS06780 (I6H71_06780) - 1450495..1450608 (+) 114 WP_194295051.1 delta-lysin family phenol-soluble modulin -
  I6H71_RS06785 (I6H71_06785) - 1450857..1451663 (-) 807 WP_103209745.1 carbon-nitrogen family hydrolase -

Sequence

Protein


Download         Length: 238 a.a.        Molecular weight: 27928.86 Da        Isoelectric Point: 4.8715

>NTDB_id=515865 I6H71_RS06760 WP_103207458.1 1447362..1448078(-) (agrA) [Staphylococcus felis strain FDAARGOS_1014]
MKILICEDDPKQRERMQQIIENYIMIEEKPMEVEIATNDPYEILEAAKNMSDIGCYFLDIQLESDINGIKLGSEIRKHDP
VGNIIFVTSHSELTYLTFVYKVAALDFIFKDDPDELQTRIIDCLETALKRLDLLTKDNTIETLELKRGSSSVYVNYDEVM
FFESSPKSHRLIAHLDNRQIEFYGNLKELAQLDDRFVRCHNSFVLNRHNISHVDSKERIAYFKNDEYCYVSVRNLKKI

Nucleotide


Download         Length: 717 bp        

>NTDB_id=515865 I6H71_RS06760 WP_103207458.1 1447362..1448078(-) (agrA) [Staphylococcus felis strain FDAARGOS_1014]
ATGAAAATACTGATTTGCGAAGATGATCCAAAACAACGTGAACGAATGCAACAAATTATTGAGAATTATATTATGATTGA
AGAAAAACCAATGGAAGTTGAAATTGCAACAAATGATCCATATGAGATTTTAGAAGCTGCTAAAAATATGTCAGACATTG
GCTGCTATTTTTTAGATATTCAACTTGAATCTGATATCAATGGTATTAAGTTAGGTAGTGAAATTAGAAAACATGATCCT
GTTGGAAATATTATTTTTGTAACAAGTCACAGTGAGTTAACATATCTCACATTTGTTTATAAAGTAGCCGCACTTGACTT
TATTTTTAAAGATGATCCTGACGAATTGCAAACGCGTATTATTGATTGTTTAGAAACTGCATTAAAACGTTTAGACTTAT
TAACAAAAGACAATACCATTGAAACATTAGAGCTAAAGCGCGGTAGTAGTTCTGTTTATGTCAATTATGATGAAGTGATG
TTTTTCGAGTCTTCTCCAAAGTCTCACCGTTTAATCGCACATTTGGACAACCGTCAAATTGAATTTTATGGTAATCTCAA
GGAACTTGCACAACTTGATGACCGCTTCGTCCGTTGTCACAATAGTTTTGTTTTAAATCGACATAATATTTCACATGTTG
ACTCTAAAGAACGCATCGCTTATTTTAAAAACGACGAGTATTGTTATGTCTCTGTTCGTAATCTCAAAAAAATATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-120)

LytTr DNA-binding domain (LytTR)

(151-237)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  agrA Staphylococcus aureus N315

82.773

100

0.828
  comE/comE1 Streptococcus equinus JB1

35.802

100

0.366