Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   SSUST1_RS10145 Genome accession   NC_017950
Coordinates   2032098..2033294 (+) Length   398 a.a.
NCBI ID   WP_014736606.1    Uniprot ID   A0A3R8NMN8
Organism   Streptococcus suis ST1     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2027098..2038294
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SSUST1_RS10105 (SSUST1_2077) - 2027329..2029908 (+) 2580 WP_014736604.1 YfhO family protein -
  SSUST1_RS10135 (SSUST1_2079) - 2030737..2031420 (-) 684 WP_012775416.1 YoaK family protein -
  SSUST1_RS10140 (SSUST1_2080) rlmH 2031445..2031924 (-) 480 WP_002941741.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  SSUST1_RS10145 (SSUST1_2081) htrA 2032098..2033294 (+) 1197 WP_014736606.1 S1C family serine protease Regulator
  SSUST1_RS10150 (SSUST1_2082) spo0J 2033355..2034119 (+) 765 WP_014736607.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 398 a.a.        Molecular weight: 41790.78 Da        Isoelectric Point: 4.5940

>NTDB_id=51493 SSUST1_RS10145 WP_014736606.1 2032098..2033294(+) (htrA) [Streptococcus suis ST1]
MERIPYMKKYLKFAILFVIGFFGGLIGALSASFFQPQVQQANSAITSVSNVQYNNETSTTKAVEKVQNAVVSVINYQKSA
NNSLGAIFGNIESSDELAVAGEGSGVIYKKDGQYAYIVTNTHVINNAEKIDILLASGEKISGELVGSDTYSDIAVIKISA
DKVTAVAEFADSDTIKVGETAIAIGSPLGSVYANTVTQGIISSLSRTVTSQSKDGQTISTNAIQTDTAINPGNSGGPLIN
TQGQVIGITSSKITSSSANSSGVAVEGLGFAIPANDAVAIINQLEKTGQVSRPALGVHMVNLTTLSTSQLEKAGLSNTEL
TSGVVIVSTQSGLPADGKLETFDVITEIDGEAIQNKSDLQSALYKHQIGDTITVTYYRNNQKQTVDIKLTHSTEELSE

Nucleotide


Download         Length: 1197 bp        

>NTDB_id=51493 SSUST1_RS10145 WP_014736606.1 2032098..2033294(+) (htrA) [Streptococcus suis ST1]
ATGGAAAGGATTCCTTATATGAAAAAATATTTGAAATTTGCGATTTTATTTGTAATTGGATTTTTTGGGGGTCTTATCGG
GGCCTTATCAGCCTCTTTCTTCCAGCCACAGGTGCAACAAGCAAATTCTGCTATCACTAGTGTCAGCAATGTTCAATATA
ATAATGAAACTTCCACCACAAAAGCTGTAGAGAAAGTACAAAATGCTGTTGTGTCTGTTATTAATTACCAAAAATCAGCC
AACAATAGTCTTGGTGCTATCTTTGGAAATATTGAATCATCTGACGAACTAGCTGTTGCTGGAGAGGGGTCTGGGGTTAT
CTATAAAAAAGATGGTCAATATGCCTATATTGTGACAAATACGCATGTTATTAATAACGCAGAAAAGATTGATATCCTTT
TAGCATCTGGAGAAAAAATTAGCGGTGAACTTGTTGGTTCCGATACATATTCTGATATAGCTGTTATAAAAATATCAGCA
GATAAAGTCACTGCTGTTGCTGAATTTGCTGATTCCGATACAATTAAAGTTGGAGAAACTGCTATCGCAATTGGTAGTCC
TCTAGGTAGCGTCTACGCCAATACAGTTACCCAGGGTATTATTTCTAGCTTAAGTCGGACAGTCACTTCACAATCAAAAG
ATGGACAAACAATCTCAACTAACGCTATTCAAACTGATACAGCTATCAACCCTGGAAACTCTGGCGGACCGTTAATCAAT
ACCCAAGGACAAGTGATAGGCATTACCTCTAGCAAAATTACCTCAAGTTCTGCAAATAGCTCAGGCGTGGCTGTAGAAGG
GTTGGGATTTGCTATTCCTGCAAATGATGCCGTAGCTATTATCAATCAGCTTGAAAAAACTGGACAAGTTAGCCGACCTG
CTCTTGGAGTTCATATGGTTAACTTGACGACCTTGTCAACTAGTCAATTAGAAAAAGCTGGATTATCAAATACGGAATTA
ACATCCGGTGTAGTAATTGTCTCTACACAAAGTGGGCTACCTGCAGATGGAAAATTAGAAACTTTTGATGTTATTACTGA
GATTGACGGAGAAGCTATTCAAAATAAGAGTGACCTCCAGAGCGCTCTCTACAAACATCAAATTGGAGATACAATCACTG
TAACTTATTACCGCAATAATCAGAAACAAACTGTTGACATTAAGTTGACACATTCTACAGAAGAACTTAGCGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A3R8NMN8

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

59.446

99.749

0.593

  htrA Streptococcus gordonii str. Challis substr. CH1

59.494

99.246

0.59

  htrA Streptococcus pneumoniae D39

57.252

98.744

0.565

  htrA Streptococcus pneumoniae TIGR4

57.252

98.744

0.565

  htrA Streptococcus mitis NCTC 12261

57.252

98.744

0.565

  htrA Streptococcus pneumoniae R6

57.252

98.744

0.565

  htrA Streptococcus pneumoniae Rx1

57.252

98.744

0.565


Multiple sequence alignment