Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   STMM8_RS09255 Genome accession   NZ_CP065787
Coordinates   1769795..1771030 (+) Length   411 a.a.
NCBI ID   WP_022096467.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain MM8     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1764795..1776030
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  STMM8_RS09225 (STMM8_09205) - 1765262..1767868 (+) 2607 WP_002946816.1 YfhO family protein -
  STMM8_RS09245 (STMM8_09225) - 1768412..1769095 (-) 684 WP_011226711.1 YoaK family protein -
  STMM8_RS09250 (STMM8_09230) rlmH 1769111..1769590 (-) 480 WP_180473206.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  STMM8_RS09255 (STMM8_09235) htrA 1769795..1771030 (+) 1236 WP_022096467.1 S1C family serine protease Regulator
  STMM8_RS09260 (STMM8_09240) spo0J 1771096..1771863 (+) 768 WP_002948582.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 411 a.a.        Molecular weight: 42872.14 Da        Isoelectric Point: 4.7061

>NTDB_id=514290 STMM8_RS09255 WP_022096467.1 1769795..1771030(+) (htrA) [Streptococcus thermophilus strain MM8]
MKKFNWKKIVAPIAMLIIGLLGGLLGAFILLTAAGVSFTNTTDNGVKTAKTVYTNITDTTKAVKKVQNAVVSVINYQEGS
SSDSLNDLYGRIFGGGDSSDSSQENSKDSDGLQVAGEGSGVIYKKDGKEAYIVTNNHVVDGAKKLEIMLSDGSKITGELV
GKDTYSDLAVVKVSSDKITTVAEFADSNSLTVGEKAIAIGSPLGTEYANSVTEGIVSSLSRTITMQNDNGETVSTNAIQT
DAAINPGNSGGALVNIEGQVIGINSSKISSTSAVAGSAVEGMGFAIPSNDVVEIINQLEKDGKVTRPALGISIADLNSLS
SSATSKLDLPDEVKSGVVVGSVQKGMPADGKLQEYDVITEIDGKKISSKTDIQTNLYSHSIGDTIKVTFYRGKDKKTVDL
KLTKSTEDISD

Nucleotide


Download         Length: 1236 bp        

>NTDB_id=514290 STMM8_RS09255 WP_022096467.1 1769795..1771030(+) (htrA) [Streptococcus thermophilus strain MM8]
ATGAAAAAATTTAACTGGAAGAAAATAGTCGCGCCAATTGCAATGCTAATTATTGGCTTACTAGGTGGTTTACTTGGTGC
CTTTATCCTACTAACAGCAGCCGGGGTATCTTTTACCAATACAACAGATAATGGAGTAAAAACGGCTAAGACCGTCTACA
CCAATATAACAGATACAACTAAGGCTGTTAAAAAAGTACAAAATGCCGTTGTTTCTGTCATCAATTATCAAGAAGGTTCA
TCTTCAGATTCACTAAATGACCTTTATGGCCGTATCTTTGGCGGAGGGGACAGTTCTGATTCTAGCCAAGAAAATTCAAA
AGATTCAGATGGTCTACAGGTCGCTGGTGAAGGTTCTGGAGTCATCTATAAAAAAGATGGCAAAGAAGCCTACATCGTAA
CCAATAACCACGTTGTCGATGGGGCTAAAAAACTTGAAATCATGCTTTCGGATGGTTCGAAAATTACTGGTGAACTTGTT
GGTAAAGACACTTACTCTGACCTAGCAGTTGTCAAAGTATCTTCAGATAAAATAACAACTGTTGCAGAATTTGCAGACTC
AAACTCCCTTACTGTTGGTGAAAAAGCAATTGCTATCGGTAGCCCACTTGGTACCGAATACGCCAACTCAGTAACAGAAG
GAATCGTTTCTAGCCTTAGCCGTACTATAACGATGCAAAACGATAATGGTGAAACTGTATCAACAAACGCTATCCAAACA
GATGCAGCCATTAACCCTGGTAACTCTGGTGGTGCCCTAGTCAATATTGAAGGACAAGTTATCGGTATTAATTCAAGTAA
AATTTCATCAACGTCTGCAGTCGCTGGTAGTGCTGTTGAAGGTATGGGGTTTGCCATTCCATCAAACGATGTTGTTGAAA
TCATCAATCAATTAGAAAAAGATGGTAAAGTTACACGACCAGCACTAGGGATCTCAATAGCAGATCTTAATAGCCTTTCT
AGCAGCGCAACTTCTAAATTAGATTTACCAGATGAGGTCAAATCCGGTGTTGTTGTCGGTAGTGTTCAGAAAGGTATGCC
AGCTGACGGTAAACTTCAAGAATATGATGTTATCACTGAGATTGATGGTAAGAAAATCAGCTCAAAAACTGATATTCAAA
CCAATCTTTACAGCCATAGTATTGGAGATACTATCAAGGTAACCTTCTATCGTGGTAAAGATAAGAAAACTGTAGATCTT
AAATTAACAAAATCTACAGAAGACATATCTGATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

61.596

97.567

0.601

  htrA Streptococcus gordonii str. Challis substr. CH1

57.524

100

0.577

  htrA Streptococcus mitis NCTC 12261

54.034

99.513

0.538

  htrA Streptococcus pneumoniae TIGR4

53.79

99.513

0.535

  htrA Streptococcus pneumoniae D39

53.79

99.513

0.535

  htrA Streptococcus pneumoniae Rx1

53.79

99.513

0.535

  htrA Streptococcus pneumoniae R6

53.79

99.513

0.535