Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   STMM8_RS09260 Genome accession   NZ_CP065787
Coordinates   1771096..1771863 (+) Length   255 a.a.
NCBI ID   WP_002948582.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain MM8     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1766096..1776863
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  STMM8_RS09245 (STMM8_09225) - 1768412..1769095 (-) 684 WP_011226711.1 YoaK family protein -
  STMM8_RS09250 (STMM8_09230) rlmH 1769111..1769590 (-) 480 WP_180473206.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  STMM8_RS09255 (STMM8_09235) htrA 1769795..1771030 (+) 1236 WP_022096467.1 S1C family serine protease Regulator
  STMM8_RS09260 (STMM8_09240) spo0J 1771096..1771863 (+) 768 WP_002948582.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 255 a.a.        Molecular weight: 29463.81 Da        Isoelectric Point: 9.6649

>NTDB_id=514291 STMM8_RS09260 WP_002948582.1 1771096..1771863(+) (spo0J) [Streptococcus thermophilus strain MM8]
MSEQLKTLSISEIYPNPFQPRLKFSDEELVELSQSISENGLIQPIIVRKSDIIGYELIAGERRLRACKRLGMTEIPAVVK
EVTDQESRKQAIIENLQRSNLNPIEEAKAYRNLIDELTYSHEELAKAMGKSRPYISNALRLLQLPREIQTSIENGSLSQG
HARALLAIEDSRKQLTIFQQVVTERWSVRTLEKKLQELPRKQKSKKDTHVKDKEKELERSLGVPITLRYHKNHSGTIQIH
FSTEEDFNRIINKLI

Nucleotide


Download         Length: 768 bp        

>NTDB_id=514291 STMM8_RS09260 WP_002948582.1 1771096..1771863(+) (spo0J) [Streptococcus thermophilus strain MM8]
ATGTCAGAACAACTCAAAACTTTATCTATTAGTGAAATTTACCCCAATCCTTTTCAACCTCGTCTAAAATTCTCCGATGA
AGAGTTAGTAGAACTAAGTCAATCAATATCAGAAAATGGTTTAATACAGCCAATTATTGTACGAAAATCTGACATTATTG
GTTATGAACTAATTGCTGGAGAAAGACGTTTACGAGCCTGTAAACGTTTAGGGATGACAGAAATCCCTGCAGTTGTAAAG
GAAGTTACAGATCAAGAGAGTCGTAAACAAGCTATTATTGAAAATCTACAACGATCAAATCTCAATCCTATTGAAGAAGC
AAAGGCCTATCGTAATTTAATTGATGAGTTAACTTATAGTCACGAGGAGCTCGCTAAAGCTATGGGAAAATCTAGACCAT
ATATTAGTAACGCTCTTAGACTACTACAACTTCCGCGAGAGATACAAACGAGTATTGAAAACGGAAGTCTGAGTCAGGGA
CATGCTAGAGCACTCTTAGCTATTGAGGATTCTCGAAAGCAGTTAACCATCTTTCAACAGGTTGTGACTGAAAGATGGTC
TGTTCGTACTCTAGAAAAAAAACTTCAGGAACTTCCTAGAAAACAAAAATCTAAAAAAGATACCCATGTAAAAGATAAAG
AAAAAGAACTTGAAAGATCACTAGGTGTCCCTATAACTCTACGTTATCACAAAAATCACTCAGGAACGATTCAAATACAC
TTTTCGACAGAAGAAGATTTTAACAGAATTATCAACAAGCTTATCTAA

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(8-95)

HTH domain found in ParB protein (HTH_ParB)

(147-196)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

56.863

100

0.569