Detailed information NTG0514281

Bioinformatically predicted

Overview

• Name: ciaR
• Type: Regulator
• Locus tag: KWY62_RS04190
• Genome accession: NZ_CP079193
• Coordinates: 828156..828827 (+)
• Length: 223 a.a.
• NCBI ID: WP_014637852.1
• Uniprot ID: -
• Organism: Streptococcus suis strain ID41570
• Function: repress competence development (predicted from homology) Competence regulation

Genomic Context

Location: 823156..833827

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KWY62_RS04160 (KWY62_04160)	pstC	823339..824256 (+)	918	WP_002937619.1	phosphate ABC transporter permease subunit PstC	-
KWY62_RS04165 (KWY62_04165)	pstA	824246..825133 (+)	888	WP_002937616.1	phosphate ABC transporter permease PstA	-
KWY62_RS04170 (KWY62_04170)	pstB	825158..825961 (+)	804	WP_002937615.1	phosphate ABC transporter ATP-binding protein PstB	-
KWY62_RS04175 (KWY62_04175)	pstB	825973..826731 (+)	759	WP_002937614.1	phosphate ABC transporter ATP-binding protein PstB	-
KWY62_RS04180 (KWY62_04180)	phoU	826760..827416 (+)	657	WP_002937611.1	phosphate signaling complex protein PhoU	-
KWY62_RS04185 (KWY62_04185)	-	827582..827962 (+)	381	WP_024401461.1	hypothetical protein	-
KWY62_RS04190 (KWY62_04190)	ciaR	828156..828827 (+)	672	WP_014637852.1	response regulator transcription factor	Regulator
KWY62_RS04195 (KWY62_04195)	ciaH	828820..830199 (+)	1380	WP_024401460.1	cell wall metabolism sensor histidine kinase WalK	Regulator
KWY62_RS04200 (KWY62_04200)	-	830300..831529 (+)	1230	WP_024401459.1	transglutaminase domain-containing protein	-
KWY62_RS04205 (KWY62_04205)	rpsT	831744..831992 (-)	249	WP_012027069.1	30S ribosomal protein S20	-
KWY62_RS04210 (KWY62_04210)	coaA	832051..832971 (-)	921	WP_024410470.1	type I pantothenate kinase	-
KWY62_RS04215 (KWY62_04215)	-	833080..833670 (+)	591	WP_024376492.1	class I SAM-dependent methyltransferase	-

Sequence

Protein

• Length: 223 a.a.
• Molecular weight: 25245.83 Da
• Isoelectric Point: 4.2183

>NTDB_id=514281 KWY62_RS04190 WP_014637852.1 828156..828827(+) (ciaR) [Streptococcus suis strain ID41570]
MIKILLVEDDLSLSNSVFDFLDDFADVMQVFDGEEGIYEAETGVYDLILLDLMLPEKDGFQVLKELREKGVTTPVLITTA
KESLEDKGHGFELGADDYLTKPFYLEELKMRIQALLKRAGKFNENTLTYGDVTVDLSTNSTTVNGEEVELLGKEFDLLVY
FLQNQNVILPKTQIFDRIWGFDSDTTISVVEVYVSKIRKKLKGTTFGENLQTLRSVGYILKNA

Nucleotide

• Length: 672 bp

>NTDB_id=514281 KWY62_RS04190 WP_014637852.1 828156..828827(+) (ciaR) [Streptococcus suis strain ID41570]
ATGATTAAAATATTGTTAGTGGAAGATGATTTAAGTCTATCAAATTCTGTTTTCGATTTCTTGGATGATTTTGCGGATGT
TATGCAGGTTTTTGATGGTGAAGAGGGTATTTATGAGGCGGAAACAGGCGTTTATGATTTGATTCTTTTGGATTTGATGT
TGCCTGAAAAAGATGGCTTCCAAGTTTTGAAAGAGTTACGTGAAAAAGGTGTTACGACACCAGTTCTGATTACAACAGCC
AAGGAAAGTTTAGAGGATAAAGGCCATGGTTTTGAATTGGGAGCTGATGACTACTTGACAAAACCGTTTTATTTAGAAGA
ATTGAAGATGCGAATTCAAGCTCTATTAAAACGAGCGGGTAAGTTTAATGAAAACACACTAACTTATGGGGACGTGACCG
TTGACTTATCGACAAACTCTACAACTGTAAATGGCGAAGAAGTTGAATTGCTAGGAAAAGAATTCGATCTACTAGTCTAC
TTCTTGCAAAATCAAAATGTTATCTTGCCAAAAACTCAAATTTTTGACCGTATTTGGGGATTTGACAGTGACACTACTAT
TTCAGTAGTAGAAGTATATGTTTCTAAAATTAGGAAAAAGTTGAAAGGAACGACCTTCGGGGAAAATCTTCAAACCCTGC
GTAGTGTCGGGTACATTCTAAAAAATGCCTAA

Domains

Predicted by InterProScan.

• Transcriptional regulatory protein, C terminal (Trans_reg_C) (145-220)

• Response regulator receiver domain (Response_reg) (4-112)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ciaR	Streptococcus mutans UA159	90.135	100	0.901
ciaR	Streptococcus pneumoniae Rx1	88.789	100	0.888
ciaR	Streptococcus pneumoniae D39	88.789	100	0.888
ciaR	Streptococcus pneumoniae R6	88.789	100	0.888
ciaR	Streptococcus pneumoniae TIGR4	88.789	100	0.888
covR	Lactococcus lactis subsp. lactis strain DGCC12653	38.053	100	0.386
vicR	Streptococcus mutans UA159	35.47	100	0.372
covR	Streptococcus salivarius strain HSISS4	36.283	100	0.368