Detailed information
Bioinformatically predicted
Overview
| Name | comA | Type | Regulator |
| Locus tag | STMM8_RS01485 | Genome accession | NZ_CP065787 |
| Coordinates | 267200..267409 (+) | Length | 69 a.a. |
| NCBI ID | WP_002946147.1 | Uniprot ID | - |
| Organism | Streptococcus thermophilus strain MM8 | ||
| Function | processing and transport of ComC (predicted from homology) Competence regulation |
||
Genomic Context
Location: 262200..272409
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| STMM8_RS01460 (STMM8_01445) | - | 262608..263147 (+) | 540 | WP_371851917.1 | tRNA (cytidine(34)-2'-O)-methyltransferase | - |
| STMM8_RS01465 (STMM8_01450) | - | 263458..264015 (+) | 558 | WP_002946140.1 | ECF transporter S component | - |
| STMM8_RS01470 (STMM8_01455) | - | 264018..264668 (+) | 651 | WP_022096567.1 | phosphatase PAP2 family protein | - |
| STMM8_RS01475 (STMM8_01460) | comR | 264863..265762 (+) | 900 | WP_002946143.1 | helix-turn-helix domain-containing protein | Regulator |
| STMM8_RS01480 | - | 266000..267178 (+) | 1179 | Protein_238 | ABC transporter transmembrane domain-containing protein | - |
| STMM8_RS01485 | comA | 267200..267409 (+) | 210 | WP_002946147.1 | hypothetical protein | Regulator |
| STMM8_RS01490 (STMM8_01485) | - | 267464..268032 (+) | 569 | Protein_240 | ATP-binding cassette domain-containing protein | - |
| STMM8_RS01495 (STMM8_01490) | - | 268140..268451 (+) | 312 | WP_022096570.1 | DUF805 domain-containing protein | - |
| STMM8_RS01500 | - | 268672..269019 (-) | 348 | WP_232089310.1 | DUF4173 domain-containing protein | - |
| STMM8_RS01505 | - | 268944..269840 (-) | 897 | WP_224103642.1 | urease cluster protein | - |
| STMM8_RS01510 (STMM8_01500) | - | 270245..270760 (+) | 516 | WP_002949547.1 | AmiS/UreI family transporter | - |
| STMM8_RS01515 (STMM8_01505) | - | 270785..271087 (+) | 303 | WP_002886558.1 | urease subunit gamma | - |
| STMM8_RS01520 (STMM8_01510) | - | 271099..271410 (+) | 312 | WP_002886559.1 | urease subunit beta | - |
Sequence
Protein
Download Length: 69 a.a. Molecular weight: 8157.54 Da Isoelectric Point: 9.7339
>NTDB_id=514247 STMM8_RS01485 WP_002946147.1 267200..267409(+) (comA) [Streptococcus thermophilus strain MM8]
MITYSMLLNYFTTPLINIIYLQSKIQQAKVANNCLQEVYVVNKEEKGQLKDLSFKQLDLKGVSHRFRYQ
MITYSMLLNYFTTPLINIIYLQSKIQQAKVANNCLQEVYVVNKEEKGQLKDLSFKQLDLKGVSHRFRYQ
Nucleotide
Download Length: 210 bp
>NTDB_id=514247 STMM8_RS01485 WP_002946147.1 267200..267409(+) (comA) [Streptococcus thermophilus strain MM8]
TTGATTACCTATAGTATGTTGCTTAATTATTTTACGACTCCTTTAATTAATATTATCTATCTTCAATCTAAGATTCAGCA
AGCCAAGGTAGCCAATAATTGTCTTCAAGAAGTTTATGTTGTGAATAAGGAAGAAAAAGGTCAACTCAAAGATTTATCCT
TTAAACAATTAGACTTAAAAGGTGTTAGTCATCGTTTCAGATACCAATAA
TTGATTACCTATAGTATGTTGCTTAATTATTTTACGACTCCTTTAATTAATATTATCTATCTTCAATCTAAGATTCAGCA
AGCCAAGGTAGCCAATAATTGTCTTCAAGAAGTTTATGTTGTGAATAAGGAAGAAAAAGGTCAACTCAAAGATTTATCCT
TTAAACAATTAGACTTAAAAGGTGTTAGTCATCGTTTCAGATACCAATAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comA | Streptococcus gordonii str. Challis substr. CH1 |
54.167 |
100 |
0.565 |
| comA | Streptococcus mitis NCTC 12261 |
52.778 |
100 |
0.551 |
| comA | Streptococcus pneumoniae Rx1 |
51.389 |
100 |
0.536 |
| comA | Streptococcus pneumoniae D39 |
51.389 |
100 |
0.536 |
| comA | Streptococcus pneumoniae R6 |
51.389 |
100 |
0.536 |
| comA | Streptococcus pneumoniae TIGR4 |
51.389 |
100 |
0.536 |
| comA | Streptococcus mitis SK321 |
50 |
100 |
0.522 |
| comA/nlmT | Streptococcus mutans UA159 |
44.286 |
100 |
0.449 |