Detailed information    

insolico Bioinformatically predicted

Overview


Name   dprA   Type   Machinery gene
Locus tag   KWZ00_RS07910 Genome accession   NZ_CP078115
Coordinates   1505124..1506311 (+) Length   395 a.a.
NCBI ID   WP_047919128.1    Uniprot ID   -
Organism   Neisseria gonorrhoeae strain O1G1370     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context


Location: 1500124..1511311
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KWZ00_RS07895 (KWZ00_07895) - 1501044..1501643 (+) 600 WP_003690128.1 DUF4390 domain-containing protein -
  KWZ00_RS07900 (KWZ00_07900) - 1501643..1503763 (+) 2121 WP_047919123.1 PAS domain-containing sensor histidine kinase -
  KWZ00_RS07905 (KWZ00_07905) - 1503756..1505033 (+) 1278 WP_003690124.1 sigma-54 dependent transcriptional regulator -
  KWZ00_RS07910 (KWZ00_07910) dprA 1505124..1506311 (+) 1188 WP_047919128.1 DNA-processing protein DprA Machinery gene
  KWZ00_RS07915 (KWZ00_07915) - 1506337..1506798 (+) 462 WP_003690120.1 DUF494 domain-containing protein -
  KWZ00_RS07920 (KWZ00_07920) topA 1506876..1509182 (+) 2307 WP_047919122.1 type I DNA topoisomerase -
  KWZ00_RS12350 - 1509403..1509531 (+) 129 Protein_1562 phosphomethylpyrimidine synthase ThiC -
  KWZ00_RS07925 (KWZ00_07925) - 1509521..1510065 (+) 545 Protein_1563 IS1595 family transposase -
  KWZ00_RS07930 (KWZ00_07930) - 1510251..1510952 (+) 702 WP_256347978.1 opacity family porin -

Sequence


Protein


Download         Length: 395 a.a.        Molecular weight: 41861.93 Da        Isoelectric Point: 6.2394

>NTDB_id=513625 KWZ00_RS07910 WP_047919128.1 1505124..1506311(+) (dprA) [Neisseria gonorrhoeae strain O1G1370]
MTEDERFAWLQLAFTPYIGAESFLLLMRSFGSAQNALSAPAEQVAPAVRHKHALEAWHNAEKRALARQAAEAALEWEMRD
GCRLMLLQDEDFPEMLTQGLTAPPVLFLRGNVRLLHKPSAAIVGSRHATPQAMRIAKDFGRALGGKGIPTVSGMASGIDT
AAHQGALEAEGGTIAVWGTGIDRIYPPANKNLAYEIAEKGLIVSEFPIGTRPYAGNFPRRNRLIAALSQVTLVVEAALES
GSLITAGLAAEMGREVMAVPGSIDNPHSKGCHKLIKDGAKLTECLDDILNECPGLLQNTGASSYSINKDTPDTGRRAVQT
AYAPPPAAKMPSEGAAGGTAVGGILDKMGFDPIHPDVLAGQLAMPAADLYAALLELELDGSVAAMPGGRYQRIRT

Nucleotide


Download         Length: 1188 bp        

>NTDB_id=513625 KWZ00_RS07910 WP_047919128.1 1505124..1506311(+) (dprA) [Neisseria gonorrhoeae strain O1G1370]
ATGACAGAGGACGAACGTTTCGCGTGGCTGCAATTGGCGTTTACGCCCTATATCGGCGCGGAAAGTTTCCTGCTGCTGAT
GCGCAGTTTCGGCAGCGCGCAAAATGCCTTGTCCGCACCGGCGGAACAGGTTGCCCCGGCGGTGCGGCATAAGCACGCGC
TTGAGGCTTGGCACAATGCAGAAAAACGCGCTTTGGCGCGGCAGGCGGCAGAAGCGGCGTTGGAATGGGAAATGCGGGAC
GGATGCCGCCTGATGCTGCTTCAGGATGAAGATTTCCCCGAAATGCTGACGCAGGGGCTGACCGCGCCGCCGGTTTTGTT
TTTGCGCGGCAACGTGCGGCTGCTGCACAAGCCTTCCGCCGCCATCGTCGGCAGCCGCCATGCCACGCCGCAGGCGATGC
GGATTGCCAAAGATTTCGGCAGGGCGTTGGGTGGGAAAGGCATTCCTACCGTGTCGGGTATGGCTTCGGGCATCGACACC
GCCGCCCATCAGGGCGCACTGGAGGCAGAAGGCGGCACCATCGCCGTGTGGGGGACGGGCATAGACCGCATTTATCCGCC
GGCCAACAAAAACCTTGCTTATGAAATCGCCGAAAAAGGGCTGATTGTCAGCGAGTTCCCCATCGGCACGCGGCCGTATG
CCGGCAACTTTCCGCGCCGCAACCGCCTGATTGCCGCGCTGTCGCAGGTTACGCTGGTGGTCGAGGCCGCCTTGGAATCC
GGTTCGCTGATTACCGCCGGCCTGGCGGCAGAAATGGGGCGCGAAGTCATGGCGGTGCCCGGTTCGATAGACAACCCCCA
CAGCAAAGGCTGCCACAAACTGATTAAAGACGGAGCGAAACTGACGGAATGTTTGGACGACATCCTGAACGAATGCCCGG
GGCTATTGCAAAATACGGGTGCTTCGTCATATTCTATAAATAAGGATACGCCCGACACGGGCCGCCGCGCCGTTCAGACG
GCATACGCCCCGCCGCCTGCCGCAAAAATGCCGTCTGAAGGGGCGGCAGGCGGCACAGCCGTCGGCGGCATACTGGATAA
AATGGGTTTCGACCCCATCCATCCCGACGTGCTTGCCGGACAGTTGGCTATGCCTGCCGCAGATTTGTATGCCGCACTGT
TGGAATTGGAATTGGACGGCAGCGTTGCCGCAATGCCCGGCGGCAGATACCAGCGTATCCGAACTTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Neisseria gonorrhoeae MS11

99.494

100

0.995

  dprA Neisseria gonorrhoeae strain FA1090

99.241

100

0.992

  dprA Neisseria meningitidis strain C311

89.924

100

0.904

  dprA Neisseria meningitidis MC58

89.924

100

0.904

  dprA Vibrio cholerae O1 biovar El Tor strain E7946

37.28

100

0.375

  dprA Vibrio cholerae strain A1552

37.28

100

0.375