Detailed information NTG0513284

Bioinformatically predicted

Overview

• Name: comGF/cglF
• Type: Machinery gene
• Locus tag: I6G42_RS03335
• Genome accession: NZ_CP065707
• Coordinates: 652439..652900 (+)
• Length: 153 a.a.
• NCBI ID: WP_038804049.1
• Uniprot ID: -
• Organism: Streptococcus oralis strain FDAARGOS_885
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 647439..657900

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6G42_RS03300 (I6G42_03300)	nagA	647849..649000 (+)	1152	WP_038804054.1	N-acetylglucosamine-6-phosphate deacetylase	-
I6G42_RS03305 (I6G42_03305)	-	649149..649514 (+)	366	WP_000286399.1	DUF1033 family protein	-
I6G42_RS03310 (I6G42_03310)	comGA/cglA/cilD	649584..650525 (+)	942	WP_038804053.1	competence type IV pilus ATPase ComGA	Machinery gene
I6G42_RS03315 (I6G42_03315)	comGB/cglB	650473..651489 (+)	1017	WP_068981894.1	competence type IV pilus assembly protein ComGB	Machinery gene
I6G42_RS03320 (I6G42_03320)	comGC/cglC	651491..651814 (+)	324	WP_038804052.1	competence type IV pilus major pilin ComGC	Machinery gene
I6G42_RS03325 (I6G42_03325)	comGD/cglD	651777..652211 (+)	435	WP_038804051.1	competence type IV pilus minor pilin ComGD	Machinery gene
I6G42_RS03330 (I6G42_03330)	comGE/cglE	652174..652476 (+)	303	WP_265101009.1	competence type IV pilus minor pilin ComGE	Machinery gene
I6G42_RS03335 (I6G42_03335)	comGF/cglF	652439..652900 (+)	462	WP_038804049.1	competence type IV pilus minor pilin ComGF	Machinery gene
I6G42_RS03340 (I6G42_03340)	comGG	652878..653290 (+)	413	Protein_646	competence type IV pilus minor pilin ComGG	-
I6G42_RS03345 (I6G42_03345)	-	653323..653913 (+)	591	WP_038804047.1	class I SAM-dependent methyltransferase	-
I6G42_RS03350 (I6G42_03350)	comYH	653972..654925 (+)	954	WP_038804046.1	class I SAM-dependent methyltransferase	Machinery gene
I6G42_RS03355 (I6G42_03355)	-	654975..656165 (+)	1191	WP_038804045.1	acetate kinase	-
I6G42_RS03360 (I6G42_03360)	rnpA	656325..656696 (+)	372	WP_000748124.1	ribonuclease P protein component	-
I6G42_RS03365 (I6G42_03365)	-	656671..657483 (+)	813	WP_038804043.1	YidC/Oxa1 family membrane protein insertase	-

Sequence

Protein

• Length: 153 a.a.
• Molecular weight: 17858.57 Da
• Isoelectric Point: 9.5951

>NTDB_id=513284 I6G42_RS03335 WP_038804049.1 652439..652900(+) (comGF/cglF) [Streptococcus oralis strain FDAARGOS_885]
MVQNSCWLSKSHKIKAFTLLESLIALIVISGGLLLFQAMSQLLISEVRYQKQSEQKEWLLFVDQLEAELERSQFEKVEGN
RIYMKQDGKDIAMGKSKSDDFRKTDSSGRGYQPMVYGLKSAQITEENQLVRFRFQFQKGLEREFIYRVEKSKS

Nucleotide

• Length: 462 bp

>NTDB_id=513284 I6G42_RS03335 WP_038804049.1 652439..652900(+) (comGF/cglF) [Streptococcus oralis strain FDAARGOS_885]
ATGGTTCAGAACAGTTGTTGGCTATCAAAGAGCCATAAGATCAAGGCTTTTACCTTGTTGGAATCTCTGATTGCCCTTAT
CGTCATTAGTGGAGGCTTACTCCTTTTTCAAGCTATGAGTCAGCTCCTCATTTCAGAAGTTCGTTACCAGAAGCAAAGCG
AGCAAAAAGAGTGGCTCTTGTTTGTGGATCAACTGGAGGCAGAGTTAGAGCGTTCGCAGTTTGAAAAGGTGGAAGGCAAT
CGCATCTACATGAAACAGGATGGTAAGGATATCGCTATGGGTAAGTCTAAATCGGATGATTTTCGGAAGACTGATAGCAG
TGGCCGGGGCTATCAGCCTATGGTTTATGGACTTAAATCCGCTCAGATTACAGAGGAAAATCAATTGGTTCGCTTTCGTT
TCCAATTTCAAAAAGGCTTAGAAAGAGAGTTTATCTATCGTGTTGAAAAATCAAAAAGTTAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (45-141)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF/cglF	Streptococcus mitis NCTC 12261	94.118	100	0.941
comGF/cglF	Streptococcus mitis SK321	92.81	100	0.928
comGF/cglF	Streptococcus pneumoniae Rx1	89.542	100	0.895
comGF/cglF	Streptococcus pneumoniae D39	89.542	100	0.895
comGF/cglF	Streptococcus pneumoniae R6	89.542	100	0.895
comGF/cglF	Streptococcus pneumoniae TIGR4	89.542	100	0.895