Detailed information NTG0513008

Bioinformatically predicted

Overview

• Name: comFC/cflB
• Type: Machinery gene
• Locus tag: I6G50_RS02680
• Genome accession: NZ_CP065691
• Coordinates: 504122..504766 (-)
• Length: 214 a.a.
• NCBI ID: WP_197909076.1
• Uniprot ID: -
• Organism: Lactococcus garvieae strain FDAARGOS_893
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 499122..509766

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6G50_RS02640 (I6G50_02640)	rplU	499258..499572 (+)	315	WP_003136338.1	50S ribosomal protein L21	-
I6G50_RS02645 (I6G50_02645)	-	499576..499920 (+)	345	WP_003136339.1	ribosomal-processing cysteine protease Prp	-
I6G50_RS02650 (I6G50_02650)	rpmA	499913..500197 (+)	285	WP_003136340.1	50S ribosomal protein L27	-
I6G50_RS02655 (I6G50_02655)	-	500510..501616 (+)	1107	WP_197909075.1	alanine dehydrogenase	-
I6G50_RS02660 (I6G50_02660)	-	501743..502702 (+)	960	WP_081167613.1	PhoH family protein	-
I6G50_RS02665 (I6G50_02665)	-	502704..503177 (+)	474	WP_003136348.1	NUDIX hydrolase	-
I6G50_RS02670 (I6G50_02670)	ybeY	503187..503675 (+)	489	WP_003136350.1	rRNA maturation RNase YbeY	-
I6G50_RS02675 (I6G50_02675)	-	503659..504120 (+)	462	WP_269668695.1	diacylglycerol kinase family protein	-
I6G50_RS02680 (I6G50_02680)	comFC/cflB	504122..504766 (-)	645	WP_197909076.1	ComF family protein	Machinery gene
I6G50_RS02685 (I6G50_02685)	comFA	504763..506019 (-)	1257	WP_197909403.1	DEAD/DEAH box helicase	Machinery gene
I6G50_RS02690 (I6G50_02690)	-	506248..506871 (+)	624	WP_197909077.1	YigZ family protein	-
I6G50_RS02695 (I6G50_02695)	-	506884..507906 (+)	1023	WP_003136363.1	DUF475 domain-containing protein	-
I6G50_RS02700 (I6G50_02700)	-	508233..509030 (+)	798	WP_003136365.1	formate/nitrite transporter family protein	-

Sequence

Protein

• Length: 214 a.a.
• Molecular weight: 24663.71 Da
• Isoelectric Point: 9.4622

>NTDB_id=513008 I6G50_RS02680 WP_197909076.1 504122..504766(-) (comFC/cflB) [Lactococcus garvieae strain FDAARGOS_893]
MKCLLCHSDFSPVPYFHQLFLLAPSLPTLCTLCDSKFQLINAPHCERCYKAEINGVCSDCLRWERKGLSVNHRAVFTYNP
AMEEYFSLYKFMGDYRLRKAFSHYFKAEKNYTLVPIPVSTERYHERGFNQVLGFLEHLNYTNLLVKKDTAAQSSLSRAER
LKNKNTFTIKAKVKIPKKVLLVDDIYTTGNTIQQAIAILKSAGVQEIKSFSLCR

Nucleotide

• Length: 645 bp

>NTDB_id=513008 I6G50_RS02680 WP_197909076.1 504122..504766(-) (comFC/cflB) [Lactococcus garvieae strain FDAARGOS_893]
ATGAAATGTTTGCTTTGTCATTCTGATTTTTCTCCCGTCCCTTATTTTCATCAGCTTTTTCTTTTAGCTCCCTCTTTGCC
TACCCTTTGTACTTTATGTGATTCTAAATTCCAGCTTATAAACGCACCACACTGTGAACGGTGTTATAAAGCCGAAATAA
ATGGGGTTTGTTCAGATTGTCTTCGATGGGAAAGAAAAGGTTTGAGTGTCAACCATCGCGCAGTGTTCACTTATAATCCC
GCTATGGAGGAATATTTTAGCCTTTATAAATTTATGGGTGATTATCGCTTACGTAAAGCATTTAGTCATTATTTCAAGGC
AGAAAAAAACTATACTCTCGTTCCCATACCTGTAAGTACAGAGCGTTATCACGAAAGAGGATTTAATCAGGTTCTTGGCT
TTCTAGAGCATCTTAACTACACAAACCTTTTAGTAAAAAAAGATACAGCAGCTCAAAGTAGTTTGTCTAGAGCTGAAAGA
TTAAAAAATAAAAATACCTTCACGATAAAAGCGAAGGTAAAAATCCCTAAAAAGGTTTTACTTGTGGATGATATCTATAC
AACGGGTAACACCATACAGCAGGCTATAGCCATTCTAAAAAGTGCGGGTGTCCAAGAAATCAAAAGTTTTTCCCTCTGTC
GCTAG

Domains

Predicted by InterproScan.

• Phosphoribosyl transferase domain (Pribosyltran) (174-213)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC/cflB	Streptococcus pneumoniae Rx1	46.818	100	0.481
comFC/cflB	Streptococcus pneumoniae D39	46.818	100	0.481
comFC/cflB	Streptococcus pneumoniae R6	46.818	100	0.481
comFC/cflB	Streptococcus pneumoniae TIGR4	46.818	100	0.481
comFC/cflB	Streptococcus mitis NCTC 12261	46.818	100	0.481
comFC/cflB	Streptococcus mitis SK321	45.909	100	0.472
comFC	Bacillus subtilis subsp. subtilis str. 168	35.242	100	0.374