Detailed information NTG0512192

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: I6H05_RS09875
• Genome accession: NZ_CP065604
• Coordinates: 2027345..2028463 (-)
• Length: 372 a.a.
• NCBI ID: WP_005567106.1
• Uniprot ID: -
• Organism: Aggregatibacter actinomycetemcomitans strain FDAARGOS_948
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 2022345..2033463

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6H05_RS09860 (I6H05_09860)	rlmB	2023460..2024197 (+)	738	WP_005544885.1	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	-
I6H05_RS09865 (I6H05_09865)	glpT	2024530..2025972 (+)	1443	WP_005570215.1	glycerol-3-phosphate transporter	-
I6H05_RS09870 (I6H05_09870)	glpQ	2026206..2027288 (+)	1083	WP_005567105.1	glycerophosphodiester phosphodiesterase	-
I6H05_RS09875 (I6H05_09875)	dprA	2027345..2028463 (-)	1119	WP_005567106.1	DNA-processing protein DprA	Machinery gene
I6H05_RS09880 (I6H05_09880)	rplI	2028683..2029132 (-)	450	WP_005544876.1	50S ribosomal protein L9	-
I6H05_RS09885 (I6H05_09885)	rpsR	2029148..2029378 (-)	231	WP_005541294.1	30S ribosomal protein S18	-
I6H05_RS09890 (I6H05_09890)	priB	2029391..2029717 (-)	327	WP_005567107.1	primosomal replication protein N	-
I6H05_RS09895 (I6H05_09895)	rpsF	2029704..2030081 (-)	378	WP_005541284.1	30S ribosomal protein S6	-
I6H05_RS09900 (I6H05_09900)	lexA	2030233..2030856 (-)	624	WP_005544873.1	transcriptional repressor LexA	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 41635.98 Da
• Isoelectric Point: 6.5725

>NTDB_id=512192 I6H05_RS09875 WP_005567106.1 2027345..2028463(-) (dprA) [Aggregatibacter actinomycetemcomitans strain FDAARGOS_948]
MNKHLALLLRLLQIPKLGPTTIHKILAQINLFELQYYDAAAFTQMGWNAQQIQAWFHPEQRYIEPALLWGEKEGNHILDY
FHPDYPELLKQIESAPPVLFVKGATSALSQQQIAIVGSRQCSSYGEYWAKYFATELTTNGFIITSGLALGIDGFCHQAVV
DLKQPTIAVLGSGLEEVYPAKHLKLAQNIIEHGGALVSEFFPLQPPIAENFPRRNRIISGLSLATLIIEATERSGSLITA
RYALEQKREIFALPGNIQSQFSQGCHKLIKQGAMLVENVEDILENLAPQMTWKKRPQNRPHFPAITKTTSASLPPPVTPS
HPELYNLIGYNPISADNLSTTLNLSIDQILIQLLELELQDLIISENGLYRRV

Nucleotide

• Length: 1119 bp

>NTDB_id=512192 I6H05_RS09875 WP_005567106.1 2027345..2028463(-) (dprA) [Aggregatibacter actinomycetemcomitans strain FDAARGOS_948]
ATGAACAAACATTTAGCACTTTTACTGCGCCTATTACAAATTCCCAAACTGGGTCCTACCACAATTCATAAAATCCTTGC
GCAAATCAATTTATTCGAATTGCAATATTACGACGCGGCTGCATTTACGCAAATGGGCTGGAACGCACAGCAAATTCAAG
CATGGTTTCATCCGGAACAGCGCTACATTGAACCGGCACTCTTGTGGGGAGAAAAAGAAGGGAATCATATTCTTGATTAT
TTTCACCCTGATTATCCCGAATTATTAAAACAAATCGAAAGCGCGCCGCCGGTATTGTTCGTCAAAGGCGCGACAAGTGC
GCTATCACAGCAACAAATCGCTATTGTCGGCAGCCGCCAATGTTCAAGTTACGGTGAATATTGGGCGAAATATTTTGCCA
CGGAATTAACCACCAATGGTTTCATCATTACCAGCGGGTTAGCATTAGGCATTGATGGTTTCTGTCATCAGGCTGTGGTC
GATTTAAAACAACCGACCATCGCGGTTTTAGGTAGCGGATTGGAAGAAGTGTATCCCGCCAAACATCTCAAATTAGCGCA
GAATATTATTGAACATGGCGGTGCGTTGGTTTCTGAATTTTTTCCGCTACAACCGCCTATTGCAGAAAATTTTCCCCGCC
GCAATCGCATTATCAGTGGGTTATCATTAGCAACCTTAATTATTGAAGCCACCGAACGTAGCGGATCATTAATTACAGCA
CGCTATGCATTAGAACAAAAGAGAGAAATTTTTGCACTACCGGGCAATATTCAAAGTCAGTTCAGCCAAGGTTGCCATAA
GCTTATTAAACAGGGCGCAATGCTGGTCGAAAACGTGGAAGATATTTTAGAAAATCTTGCGCCACAAATGACATGGAAAA
AACGCCCGCAAAATCGACCGCACTTTCCCGCTATAACGAAAACGACGTCCGCCTCATTACCACCCCCGGTCACACCGTCT
CATCCTGAGTTATATAATTTGATCGGTTATAATCCGATAAGCGCGGATAACTTATCAACCACCCTTAATTTGTCTATTGA
TCAAATTCTCATTCAACTGTTGGAACTGGAATTACAGGATTTAATTATCAGTGAGAACGGGTTATATCGGCGGGTTTGA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (71-277)

• DprA winged helix domain (DprA_WH) (311-365)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Haemophilus influenzae Rd KW20	63.298	100	0.64
dprA	Glaesserella parasuis strain SC1401	54.261	94.624	0.513
dprA	Vibrio cholerae strain A1552	42.781	100	0.43
dprA	Vibrio campbellii strain DS40M4	43.207	98.925	0.427
dprA	Legionella pneumophila strain ERS1305867	40.541	99.462	0.403