Detailed information
Bioinformatically predicted
Overview
| Name | comGG/cglG | Type | Machinery gene |
| Locus tag | SIR_RS18205 | Genome accession | NC_022246 |
| Coordinates | 1758548..1758874 (-) | Length | 108 a.a. |
| NCBI ID | WP_021003256.1 | Uniprot ID | T1ZGR6 |
| Organism | Streptococcus intermedius B196 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1753548..1763874
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SIR_RS18190 (SIR_1660) | glmS | 1754054..1755868 (-) | 1815 | WP_021003253.1 | glutamine--fructose-6-phosphate transaminase (isomerizing) | - |
| SIR_RS18195 (SIR_1661) | - | 1756258..1757457 (-) | 1200 | WP_021003254.1 | acetate kinase | - |
| SIR_RS18200 (SIR_1662) | comGH | 1757504..1758457 (-) | 954 | WP_021003255.1 | class I SAM-dependent methyltransferase | Machinery gene |
| SIR_RS18205 (SIR_1663) | comGG/cglG | 1758548..1758874 (-) | 327 | WP_021003256.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| SIR_RS18210 (SIR_1664) | comGF/cglF | 1758855..1759292 (-) | 438 | WP_003073990.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| SIR_RS18215 (SIR_1665) | comGE/cglE | 1759276..1759569 (-) | 294 | WP_003073987.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| SIR_RS18220 (SIR_1666) | comGD | 1759541..1759969 (-) | 429 | WP_021003257.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| SIR_RS18225 (SIR_1667) | comGC | 1759929..1760246 (-) | 318 | WP_003075998.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| SIR_RS18230 (SIR_1668) | comGB | 1760243..1761265 (-) | 1023 | WP_021003258.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| SIR_RS18235 (SIR_1669) | comGA | 1761207..1762148 (-) | 942 | WP_003073980.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| SIR_RS18240 (SIR_1670) | - | 1762217..1762582 (-) | 366 | WP_021003259.1 | DUF1033 family protein | - |
Sequence
Protein
Download Length: 108 a.a. Molecular weight: 12912.89 Da Isoelectric Point: 10.6199
>NTDB_id=51153 SIR_RS18205 WP_021003256.1 1758548..1758874(-) (comGG/cglG) [Streptococcus intermedius B196]
MWKQKVKAGIMLHALFMTAVFSLLLQFYLHRQTASHRNFTLNRERLQAYAMAVIANEDSRHREFDKGHVQEQQGEKELIL
TVTMKTGRHYQFRFPFEKTKLTNDNRDK
MWKQKVKAGIMLHALFMTAVFSLLLQFYLHRQTASHRNFTLNRERLQAYAMAVIANEDSRHREFDKGHVQEQQGEKELIL
TVTMKTGRHYQFRFPFEKTKLTNDNRDK
Nucleotide
Download Length: 327 bp
>NTDB_id=51153 SIR_RS18205 WP_021003256.1 1758548..1758874(-) (comGG/cglG) [Streptococcus intermedius B196]
GTGTGGAAACAAAAAGTTAAAGCAGGTATTATGCTCCATGCCCTTTTTATGACAGCTGTCTTTAGCTTGCTTTTGCAATT
TTATCTTCATCGTCAGACCGCTAGTCATAGAAATTTTACTCTAAACCGAGAACGACTACAGGCGTATGCAATGGCAGTTA
TCGCAAACGAAGATTCTAGACACAGAGAATTTGATAAAGGACATGTCCAAGAGCAACAAGGTGAGAAAGAGCTCATTCTG
ACAGTAACAATGAAGACAGGTCGCCATTATCAATTTCGTTTTCCGTTTGAGAAGACCAAACTAACCAATGACAATCGAGA
CAAATAA
GTGTGGAAACAAAAAGTTAAAGCAGGTATTATGCTCCATGCCCTTTTTATGACAGCTGTCTTTAGCTTGCTTTTGCAATT
TTATCTTCATCGTCAGACCGCTAGTCATAGAAATTTTACTCTAAACCGAGAACGACTACAGGCGTATGCAATGGCAGTTA
TCGCAAACGAAGATTCTAGACACAGAGAATTTGATAAAGGACATGTCCAAGAGCAACAAGGTGAGAAAGAGCTCATTCTG
ACAGTAACAATGAAGACAGGTCGCCATTATCAATTTCGTTTTCCGTTTGAGAAGACCAAACTAACCAATGACAATCGAGA
CAAATAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGG/cglG | Streptococcus mitis NCTC 12261 |
47.525 |
93.519 |
0.444 |
| comGG/cglG | Streptococcus mitis SK321 |
43.564 |
93.519 |
0.407 |
| comGG/cglG | Streptococcus pneumoniae Rx1 |
42 |
92.593 |
0.389 |
| comGG/cglG | Streptococcus pneumoniae D39 |
42 |
92.593 |
0.389 |
| comGG/cglG | Streptococcus pneumoniae R6 |
42 |
92.593 |
0.389 |
| comGG/cglG | Streptococcus pneumoniae TIGR4 |
42 |
92.593 |
0.389 |